FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005301905

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005301905
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences524
Sequences flagged as poor quality0
Sequence length200-201
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACGAAGGATGCAAGCGTTATCCGGATTCATTGGGTTTAAAGGGAGCGTA11722.328244274809162No Hit
TACGTAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCA7113.549618320610687No Hit
TACGTAGGTCCCGAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCA336.297709923664121No Hit
TACGGAGGGGGTTAGCGTTGTTCGGAATGACTGGGCGTAAAGCGCGCGTA275.152671755725191No Hit
TACGTAGGTGGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGCGCGCGCA264.961832061068702No Hit
TACGTAGGTGGCAAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCA234.3893129770992365No Hit
TACGAAGGGGGCTAGCGTTGCTCGGAATTACTGGGCGTAAAGGGCGCGTA163.0534351145038165No Hit
TACGTAGGTGGCAAGCGTTATCCGGAATTATTGGGCGTAAAGCGCGCGTA122.2900763358778624No Hit
TACGTAGGGTCCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCA122.2900763358778624No Hit
TACGTAGGGTGCGAGCGTTGTCCGGAATTACTGGGCGTAAAGAGCTCGTA101.9083969465648856No Hit
TACGGAGGATCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA91.717557251908397No Hit
TACGGAGGATCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTA81.5267175572519083No Hit
TACAGAGGGTGCGAGCGTTAATCGGATTTACTGGGCGTAAAGCGTGCGTA71.3358778625954197No Hit
TACGTAGGGCGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCTCGTA71.3358778625954197No Hit
TACGGAAGGTCCGGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA71.3358778625954197No Hit
TACAGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCGCGTA61.1450381679389312No Hit
TACGAAGGGTGCAAGCGTTACTCGGAATTACTGGGCGTAAAGCGTGCGTA61.1450381679389312No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTA50.9541984732824428No Hit
TACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCACGCA50.9541984732824428No Hit
TACGTAGGGCGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGGGCTTGTA50.9541984732824428No Hit
TACGTAGGTGGCAAGCGTTATCCGGATTTATTGGGCGTAAAGCGAGCGCA40.7633587786259541No Hit
TACGTAGGGTGCAAGCGTTAATCGGAATTATTGGGCGTAAAGCGAGTGCA40.7633587786259541No Hit
TACGTAGGGCGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCTTGTA40.7633587786259541No Hit
TACGTAGGTGGCAAGCGTTGTCCGGATTTATTGGGCGTAAAGCGCGCGCA30.5725190839694656No Hit
TACGTAGGGTGCAAGCGTTATCCGGAATTATTGGGCGTAAAGGGCTCGTA30.5725190839694656No Hit
TACGTAAGGACCGAGCGTTGTCCGGAATCATTGGGCGTAAAGGGTACGTA30.5725190839694656No Hit
TACGTAGGTGGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGGGCGCGCA30.5725190839694656No Hit
TACGTAGGTCCCGAGCGTTATCCGGATTTATTGGGCGTAAAGCGAGCGCA30.5725190839694656No Hit
TACGTAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGGGCGCA30.5725190839694656No Hit
TACGTAGGGAGCAAGCGTTGTCCGGATTTACTGGGTGTAAAGGGTGCGTA30.5725190839694656No Hit
TACGGAGGGTGCGAGCGTTAATCGGAATAACTGGGCGTAAAGGGCACGCA20.38167938931297707No Hit
TACGTATGTCGCAAGCGTTATCCGGAATTATTGGGCATAAAGGGCATCTA20.38167938931297707No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGCA20.38167938931297707No Hit
TACGTAGGGGGCGAGCGTTATCCGGATTCATTGGGCGTAAAGCGCGCGTA20.38167938931297707No Hit
TACGTAGGGTGCGAGCGTTGTCCGGAATTACTGGGCGTAAAGAGCTCGCA20.38167938931297707No Hit
TACGTATGGTGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGCA20.38167938931297707No Hit
TACGTAGGGTGCAAGCGTTGTCCGGAATTACTGGGCGTAAAGAGCTCGTA20.38167938931297707No Hit
TACGGAAGGTCCAGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA20.38167938931297707No Hit
AACGTAGGGTGCAAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGCA20.38167938931297707No Hit
TACGTAGGGTGCGAGCGTTGTCCGGAATTACTGGGCGTAAAGCGCTCGTA20.38167938931297707No Hit
GACGAAGGATGCAAGCGTTATCCGGATTTATTGGGTTTAAAGCGAGCGCA10.19083969465648853No Hit
TACGTAGGTCGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGCGCTCGCA10.19083969465648853No Hit
TACGAAGGATGCAAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA10.19083969465648853No Hit
TACGTAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAACGCGTGCGCA10.19083969465648853No Hit
TACGTAGGTCGCAAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGTGCA10.19083969465648853No Hit
TACGTATGTCGCAAGCGTTATCCGGAATTATTGGGCGTAAAGGGCTTGTA10.19083969465648853No Hit
TACGTAGGTGACAAGCGTTGTCCGGATTTACTGGGCGTAAAGGGCGCGTA10.19083969465648853No Hit
TACGTATGGTGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGTGCGTA10.19083969465648853No Hit
TACGGAGGCTGCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGCA10.19083969465648853No Hit
TACGGAGGATGCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTA10.19083969465648853No Hit
TACGTAGGGAGCGAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGTA10.19083969465648853No Hit
TACGTAGGTCCCGAGCGTTGTCCGGATTCATTGGGCGTAAAGCGAGCGCA10.19083969465648853No Hit
TACGTAGGGGGCAAGCGTTATCCGGAATTACTGGGTGTAAAGGGTGCGTA10.19083969465648853No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGCGTAAAGGGAGCGCA10.19083969465648853No Hit
TACGGAAGGTCCGGGCGTTATCCGGAATTATTGGGTTTAAAGGGAGCGCA10.19083969465648853No Hit
TACGTATGGTGCAAGCGTTATCCGGATTTACTGGGCGTAAAGGGAGCGCA10.19083969465648853No Hit
TACGTAGGGGGCGAGCGTTGTCCGGAATGATTGGGCGTAAAGGGCGCGTA10.19083969465648853No Hit
TACGTAGGGTGCGAGCGTTGTCCGGATTTATTGGGCGTAAAGGGCTCGTA10.19083969465648853No Hit
TACGTAGGGGGCGAGCGTTATCCGGATTCATTGGGCGTAAAGCGCGCGCA10.19083969465648853No Hit
TACGTAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTGAAGCGCGCGCA10.19083969465648853No Hit
TACGTAGGTGGCAAGCGTTGTCCGAATTTACTGGGCGTAAAGGGCGTGCA10.19083969465648853No Hit
TACGTATGGGGCGAGCGTTATCCGGATTCATTGGGCGTAAAGCGCGCGTA10.19083969465648853No Hit
TACGTAGGTGGCAAGCGTTATCCGGATTTATTGGGCGTAAAGGGCGTGTA10.19083969465648853No Hit
TACGTAGGTGGCAAGCGTCGTCCGGATTTATTGGGCGTAAAGCGAGCGCA10.19083969465648853No Hit
TACGTAGGGTGCGAGCGTTGTCCGGATTTTTTGGGCGTAAAGGGCTCGTA10.19083969465648853No Hit
TACGTAGGGCGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGGGCTTGCA10.19083969465648853No Hit
TACGGAGGGTGCAAGCGTTGTCCGGAATTACTGGGCGTAAAGAGCTCGTA10.19083969465648853No Hit
TACGTAGGTCATCTAGGCGGCCAGATAAGTCTGGGGTGAAAACTTGCGGC10.19083969465648853No Hit
AAGAGCCTCGATACGCTCAAAGTCAAAATAATCAGCGTGACATTCAGAAG10.19083969465648853No Hit
TACGTAGGGTGCAAGCGTTGTCCGGAATTACTGGGCGTAAAGCGCTCGTA10.19083969465648853No Hit
TACGTAGGTCCCGAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCG10.19083969465648853No Hit
TACGTAGGGTGCAAGCGTTGTCCGGAATTACTGGGCGTAAAGAGCTCGCA10.19083969465648853No Hit
TACAGAGGGTGCGAGCGTTAATCGGATTTACTGGGCGTAAAGCGAGCGTA10.19083969465648853No Hit
TACGTAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTGAAGCGTGCGCA10.19083969465648853No Hit
TACGTAGGTTGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGCGCGCGCA10.19083969465648853No Hit
TACGGAGGGCGCGAGCGTTAATCGGAATAACTGGGCGTAAAGGGCACGCA10.19083969465648853No Hit
TACGTAGGGGGCGAGCGTTGTCCGGATTTATTGGGCGTAAAGGGCGCGTA10.19083969465648853No Hit
TACGTAGGGCGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGCGCTCGTA10.19083969465648853No Hit
TACGTAGGGTGCAAGCGCTAATCGGAATTACTGGGCGTAAAGCGTGCGCA10.19083969465648853No Hit
TACGTAGGTGGCAAGCGTTATCCGGATTCATTGGGCGTAAAGCGCGCGTA10.19083969465648853No Hit
TACGGAGGATGCGAGCGTTATTCGGAATCATTGGGTTTAAAGGGTCTGTA10.19083969465648853No Hit
TACGGAAGGTCCGGGCGTTATCCGGAGTTATTGGGTTTGAAGGGAGCGTA10.19083969465648853No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGCGTAAAGGGAGCGTA10.19083969465648853No Hit
TACGTAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGAGCGCA10.19083969465648853No Hit
TACGTAGGTTGCAAGCGTTGTCCGGATTTACTGGGTGTAAAGGGCGCGTA10.19083969465648853No Hit
TACGTATGGAGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGTGTA10.19083969465648853No Hit
TACGTAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCGCGCA10.19083969465648853No Hit
TACGTAGGTTGCAAGCGTTGTCCGGATTTACTGGGTGTAAAGGGCGCGCA10.19083969465648853No Hit
GACGAAGGCTGCAAGCGTTATCCGGATTCATTGGGTTTAAAGGGAGCGTA10.19083969465648853No Hit
TACGTAGGGCGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCTCGTA10.19083969465648853No Hit
TACGTAGGGGGCAAGCGTTGTCCGGAATAATTGGGCGTAAAGGGCGCGTA10.19083969465648853No Hit
TACGTATGGAGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGTGCGTA10.19083969465648853No Hit
TACGTAGGTTGCAAGCGTTATCCGGAATTATTGGGCGTAAAGCGCTCGCA10.19083969465648853No Hit
TACGGAGGATTCAAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTA10.19083969465648853No Hit
GACGAAGGATGCAAGCGTTATCCGGATTCATTGGGCTTAAAGGGAGCGTA10.19083969465648853No Hit
TACGGAGGGTGCAAGCGTTGTTCGGAATTATTGGGCGTAAAGCGCGTGCA10.19083969465648853No Hit
TATGTAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCA10.19083969465648853No Hit
TACGTAGGTGGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCGCGCA10.19083969465648853No Hit
TACGTAGGTCCCGAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGTGCA10.19083969465648853No Hit

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAGGCGG103.549007E-4324.33334195
AAGGCAG251.0984877E-8259.46667195
GGATGCA151.929024E-5194.67
TGGCAAG151.929024E-5194.69
AGGATGC151.929024E-5194.66
GATGCAA151.929024E-5194.68
ACGTAGG305.456968E-12194.62
CGAAGGA151.929024E-5194.63
AGGTGGC151.929024E-5194.66
TACGTAG305.456968E-12194.61
GACGAAG151.929024E-5194.61
ATGCAAG151.929024E-5194.69
AAGGATG151.929024E-5194.65
GGTGGCA151.929024E-5194.67
GTGGCAA151.929024E-5194.68
ACGAAGG151.929024E-5194.62
GAAGGAT151.929024E-5194.64
GGTCCCG100.0021228478194.599997
GTCCCGA100.0021228478194.599998
AGGTCCC100.0021228478194.599996