FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005301908

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005301908
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences428
Sequences flagged as poor quality0
Sequence length200-201
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTGTTTGATCCCCGCACTTTCGAGCCTCAGTGTCAGTTACAGTTTTGTG10424.299065420560748No Hit
CCTGTTTGCTCCCCACGCTTTCGCACCTCAGCGTCAATACCAGTCCAGTG4710.981308411214954No Hit
CCTGTTTGCTCCCCACGCTTTCGTGCATGAGCGTCAGTGTTATCCCAGGG347.943925233644859No Hit
CCTGTTTGATCCCCACGCTTTCGCACATCAGCGTCAGTTACAGACCAGAA255.841121495327103No Hit
CCTGTTTGCTCCCCACGCTTTCGTGCATGAGCGTCAGTACAGGTCCAGGG204.672897196261682No Hit
CCTGTTTGCTCCCCACGCTTTCGTGCATGAGCGTCAATCTTGACCCAGGG163.7383177570093453No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAGCGTCAGTTACAGACCAGAG153.5046728971962615No Hit
CCTGTTTGCTCCCCACGCTTTCGCGCCTCAGTGTCAGTTACAGACCAGAA133.0373831775700935No Hit
CCCGTTCGCTCCCCTGGCTTTCGCGCCTCAGCGTCAGTTTTCGTCCAGAA81.8691588785046727No Hit
CCTGTTCGCTCCCCACGCTTTCGAGCCTCAGCGTCAGTTACAGACCAGAG71.6355140186915886No Hit
CCTGTTTGCTCCCCATGCTTTCGTACCTCAGCGTCAGTATTAGGCCAGAT61.4018691588785046No Hit
CCTGTTTGCTCCCCACGCTTTCGCGTCTCAGCGTCAGTATCGGTCCAGGA61.4018691588785046No Hit
CCTGTTTGCTACCCACGCTTTCGTGCCTCAGTGTCAGTCCAGGCCCAGGC51.1682242990654206No Hit
CCTGTTCGCTACCCATGCTTTCGCTCCTCAGCGTCAGTTACTACCCAGAG30.7009345794392523No Hit
CCTGTTCGCTACCCATGCTTTCGCTCCTCAGCGTCAGTAACTGCCCAGTA20.46728971962616817No Hit
CCTGTTTGATCCCCGCACTTTCGAGCCTCAGTGTCAGTTACAGTTCTGTG20.46728971962616817No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAACGTCAGTTACAGTCCAGTA20.46728971962616817No Hit
CCTGTTTGATCCGCGCACTTTCGAGCCTCAGTGTCAGTTACAGTTTTGTG20.46728971962616817No Hit
CCTGTTCGCTACCCATGCTTTCGAGCCTCAGCGTCAGTTACAGACCAGAC20.46728971962616817No Hit
CCTGTTCGCTCCCCCAGCTTTCGCGCCTCAGCGTCGGTCTCGGCCCAGAG20.46728971962616817No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAACGTCAGTTACCGTCCAGTA20.46728971962616817No Hit
CCTGTTCGCTACCCACGCTTTCGAGCCTCAACGTCAGTTACAGACCAGTC10.23364485981308408No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAACGTCAGTCATCGTCCAGTA10.23364485981308408No Hit
CCTGTTTGATCCCCACGCTTTCGAGCTTCAGCGTCAGTTACGCTCCAGTA10.23364485981308408No Hit
CCTGTTTGATCCCCGCACTTTCGAGCTTCAGTGTCAGTTACAGTTTTGTG10.23364485981308408No Hit
CCTGTTTGATACCCACACTTTCGAGCATCAATGAGTATCAACTGCAATTT10.23364485981308408No Hit
CCTGTTTGCTCCCCACACTTTCGCTCCTCAGCGTCAGTAACGGCCCAGAG10.23364485981308408No Hit
CATGTTCTCTACCCCCGACCTACTACCTCCTTCTACTCTACATACCACAG10.23364485981308408No Hit
CCTGTTCGATACCCGCACCTTCGAGCTTCAGCGTCAGTTGCGCTCCCGTC10.23364485981308408No Hit
CCTGTTTGCTACCCACGCTTTCGCACCTCAGTGTCAGTATGATGCCAGGG10.23364485981308408No Hit
CCTGTTTGCTCCCCACGCTTTCGTGCCTCAGCGTCAGTATCGGGCCAGTG10.23364485981308408No Hit
CCTGTTTGCTCCCCTCGCTTTCGCACCTCAGCGTCAGTTGCTCTCCAGCG10.23364485981308408No Hit
CCCGTTCGCTCCCCTCGCTTTCGCGCCTCAGCGTCAGTTTTCGTCCCGAA10.23364485981308408No Hit
CCTGTTTGCTCCCCACGCTTTCGCGCATGAGCGTCAGTACAGGTCCAGGG10.23364485981308408No Hit
AACTTGCCGCCGCGTGAAATTTCTATGAAGGATGTTTTCCGTTCTGGTGA10.23364485981308408No Hit
CCTGTTTGCTCCCCACGCTTTCGCACCGCAGCGTCAATACCAGTCCAGTG10.23364485981308408No Hit
CCTGTTTGCTCCCCACGCTTTCGTTCCTCAGCGTCAGTTACAGTCCAGAG10.23364485981308408No Hit
CCTGTTTGCTCCCCACACTTTCGTGCTTTAACGTCAGTTTCTGTCCAGTA10.23364485981308408No Hit
CCTGTTTGCTCCCCACGCCTTCGAGCCTCAACGTCAGTTTTCGTCCAGCA10.23364485981308408No Hit
CCTGTTCGATACCCGCACTTTCGAGCTTCAGCGTCAGTTGCGCTCCAGTG10.23364485981308408No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAGCGTCAGTAATCGTCCAGTA10.23364485981308408No Hit
CCTGTTAGAGACCCGCACCTTCGAGCAGCAGCGTCAGTAATGTTTTCCCC10.23364485981308408No Hit
CCTGTTCGATACCCGCACTTTCGAGCTTCAGCGTCAGTCGTGCTCCCGTA10.23364485981308408No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAGCGTCAGTTACAATCCAGAG10.23364485981308408No Hit
CCTGTTTGCTACCCACGCTTTCGAGCCTCAGCGTCAGTTACAGACCAGAC10.23364485981308408No Hit
CCTGTTTGATCCCCGCACTTTCGAGCCTCAGCGTCAGTTACAGTCTAGTG10.23364485981308408No Hit
CTTAAGAGGGCGTTCAGCAGCCAGCTTGCGGCAAAACTGCGTAACCGTCT10.23364485981308408No Hit
CCTGTTCGATACCCACGCTTTCGTGCCTCAGCGTCTGTCGCACCCTAGCA10.23364485981308408No Hit
TGTTTTCCGTTCTGGTGATTCGTCTAAGAAGTTTAAGATTGCTGAGGGTC10.23364485981308408No Hit
CCTGTTTGCCCCCCACGCTTTCGAGCCTCAGCGTCAGTTACAGACCAGAG10.23364485981308408No Hit
CCTGTTTGATACCCGCACCTTCGAGCTTAAGCGTCAGTTGCGCTCCCGTC10.23364485981308408No Hit
CCTGTTTGATCCCCGCACCTTCGAGCTTAAGCGTCAGTTGCGCTCCCGTC10.23364485981308408No Hit
CCTGTTTGCTCCCCACGCTTTCGCGCCTCAGTGTCAGTTACAGCCCAAAA10.23364485981308408No Hit
CCTGTTTGCTACCCACGCTTTCGCGCTTAAGCGTCAGTATCTGTCCAGTA10.23364485981308408No Hit
CCTGTTCTCTCCCCACGCTTTCGAGCCTCAGCGTCAGTTACAGACCAGAG10.23364485981308408No Hit
CCTGTTTGATACCCACACTTTCGAGCCTCAATGTCAGTTGCAGCTTAGCA10.23364485981308408No Hit
CCTGTTTGCTCCCCACGCTTTCGCGCATGAGCGTCAGTGTCATCCCAGGG10.23364485981308408No Hit
CCTGTTTGCTCCCCACGCTTTCGCACCTCAGTGTCAGTATCAGTCCAGGC10.23364485981308408No Hit
CCTGTTTGCTACCCACACTTTCGAGCCTCAGCGTCAGTTGCTGCCCAGTA10.23364485981308408No Hit
CCTGTTCGATACCCACGCTTTCGCGCCTCAGCGTCAGTTACAGACCAGAG10.23364485981308408No Hit
ACTGTTTGCTACCCAAGCTTTCGAACCTCAGTGTCAGTACCAGTCAAGGA10.23364485981308408No Hit
CCTGTTTGCTCCCCACGCTTTCGCGCCTCACCGTCAGTTGTCGTCTAGCA10.23364485981308408No Hit
CCTGTTCGCTCCCCACGCTTTCGTCCATCAGCGTCAATTAATTGTTAGTA10.23364485981308408No Hit
CCTGTTTGCTCCCCACGCTTTCGCGCATGAGCGTCAGTGTTATCCCAGGG10.23364485981308408No Hit
CCTGTTTGCTCCCCACGCTTTCGCGCCTCAGCGTCAGTTACAGACCAGAG10.23364485981308408No Hit
CCTGTTCGCTCCCCTGGCTTTCGCGCTTCAGCGTCAGTTTTCGTCCAGTA10.23364485981308408No Hit
CCTGTTTGCTCCCCACGCTTTCGCACCTCAGCGTCAATATCAGTCCAGTG10.23364485981308408No Hit
CCTGTTCGCTCCCCACGCTTTCGAGCCTCAGCGTCATTTACAGACCAGAG10.23364485981308408No Hit
CCTGTTCCCTCCCCTCCCCTTCCCGCTTCAGCTTCATTTCCGGTCCCTTC10.23364485981308408No Hit
CCTGTTCGCTACCCACACTTTCGAGCCTCAGCGTCAGTTACAGACCAGTG10.23364485981308408No Hit
CCTGTTCGATCCCCACGCTTTCGTGCATCAGCGTCAGTTATGGCTTGGAA10.23364485981308408No Hit
CCTGTTTGCTACCCATGCTTTCGTGCCTCAGCGTCAGTTATATCCCAGTA10.23364485981308408No Hit
CCTGTTTGATCCCCACGCTTTCGTGCATCAGCGTCAGTAATGGCTTGGCA10.23364485981308408No Hit
CCTGTTTGCTCCCCACCCTCTCGATCCTCAGCGTTATTTACAGATCAGAG10.23364485981308408No Hit
CCCGTTCGCTCCCCTCGCTTTCGCGCCTCAGCGTCAGTTTTCGTCCAGTA10.23364485981308408No Hit
CCTGTTTGCTACCCCCGCTTTCGCGCTTTAGCATCAGTATCTGTCCAGTA10.23364485981308408No Hit
CCTGTTTGCTACCCACACTTTCGAGCCTCAGCGTCAGTTGGTGACCAGTA10.23364485981308408No Hit
CCTGTTCGCTCCCCACCCTTTCGAGCCTCAGCGTCAGTTACACACCCGAC10.23364485981308408No Hit
CCTGTTTGCTCCCCACGCTGTCGTGCATGAGCGTCAGTACAGGTCTAGGG10.23364485981308408No Hit
CCTGTTTGCTCCCCACGCTTTCGCACCTCAGCGTCAGTTACAATCCAGTG10.23364485981308408No Hit
CCTGTTTGCTCCCCACGCTTTCGAACATGAGCGTCAGTACTTTCCCAGGA10.23364485981308408No Hit
CCTGTTTGATCCCCACGCTTTCGAACATCAGCGTCAGTTACCGTCCAGAA10.23364485981308408No Hit
CCTGTTCGCTCCCCACGCTTTCGCTCCTCAGCGTCATGAAAGGTCCAGAG10.23364485981308408No Hit
CCTGTTTGATCCCCGCACTTTCGAGCATCAGTGTCAGTTACAGTTTTGTG10.23364485981308408No Hit
CCTGTTTGCTACCCACGCTTTCGCACCTCAGCGTCAGTTTCATGCCCGTC10.23364485981308408No Hit
CCTGTTTGCTCCCCACACTTTCGCGCCTCAGCGTCAGTTGTCGTCCAGAA10.23364485981308408No Hit
CCTGTTCGCTCCCCTTGCTTTCGCGCCTCAGCGTCAGTTATCGTCCAGAA10.23364485981308408No Hit
CCTGTTCGATACCCACGCCTTCGAGCTTAAGCGTCAGTTGCACTCCCGTC10.23364485981308408No Hit
CCTGTTCGCTACCCAAGCTTTCGCGCCTCAGCGTCAGTCTCGGCCCAGTA10.23364485981308408No Hit
CCTGTTCGATACCCGCACCTTCGTGCTTAAGCGTCAGTTGCGCTCCAGTA10.23364485981308408No Hit
CCCGTTCGCTCCCCTGGCTTTCGCGCCTCAGCGTCAGTTATCGTCCAGAA10.23364485981308408No Hit
CCTGTTCGCTCCCCACGCTTTCGCTCCTCAGCGTCAGTTACGGCCCCAAC10.23364485981308408No Hit
CCTGTTCGCTCCCCCGGCTTTCGCACTTCAGCGTCAGTTTCCGTCCAGTG10.23364485981308408No Hit
CCTGTTTGATCCCCACGCTTTCGAACATCAGCGTCAGTTACAGACCAGAG10.23364485981308408No Hit
CCCGTTTGCTCCCCAGGCTTTCGAGCCTCAGCGTCAGTTACCGTCCAGAG10.23364485981308408No Hit
CCTGTTTGATCCCCGCACTTTCGAGCCTCAGCGTCAGTTGCCCTCCAGTA10.23364485981308408No Hit
CCTGTTTGATACCCACACTTTCGAGCATGAACGTCAGTGCTATCCCAGAC10.23364485981308408No Hit
CCTGTTTGCTACCCACACTTTCGAGCCTCAGCGTCAGTTGGTGCCCAGTA10.23364485981308408No Hit
CCTGTTTGCTCCCCATGCTTTCGCACCTCAGCGTCAGTATTAGGCCAGAT10.23364485981308408No Hit
CCTGTTCGCTCCCCACGCTTTCGCGCCTCAGCGTCAGTTACCGTCCAGAG10.23364485981308408No Hit
CCTGTTCGATACCCGCACTTTCGAGCTTCAGCGTCAGTTGCGCTCCAGTC10.23364485981308408No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAGCGTCAGTTACAAGCCAGTG10.23364485981308408No Hit
CCTGTTTGATCCCCGCACTTTCGAGCCTCAGCGTCAGTTACAGTTTTGTG10.23364485981308408No Hit
CCTGTTCGTTTCCCACGCTTTCGAGCCTCAGCGTCAGTTACAGACCAGAG10.23364485981308408No Hit
CCTGTTTGCTCCCCAAGGTTGCGCACCTCAGCGTTAATACCAGTTTAGTG10.23364485981308408No Hit
CCTGTTTGCTCCCCACGCTTTCGTGCATGAGCGTCAGTATTATCCCAGTA10.23364485981308408No Hit
CCTGTTTGATACCCATGCTTTCGTACTTCAGCGTCAGTATTACCTCAGTA10.23364485981308408No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAGCGTCAGTTACCGTCCAGTG10.23364485981308408No Hit
CCTGTTCGCTCCCCCGGCTTTCGCACTTCAGCGTCAGTTGCCGTCCAGTG10.23364485981308408No Hit
CCTGTTTGCTCCCCACGCTTTCGTGCCTCAGCGTCAGTTTCAGTCCAGAA10.23364485981308408No Hit
AATATTAGACATAATTTATCCTCAAGTAAGGTGCCGAAGCCCCTGCAATT10.23364485981308408No Hit
CCTGTTTGCTCCCCACGCTTTCGCGCCTCAGCGTCAGTTACCGACCAGAG10.23364485981308408No Hit
CCTGTTTGCTACCCACGCTTTCGCGCTTTAGCGTCAGTAACTGTTTAGTA10.23364485981308408No Hit
CCTGTTTGCTCCCCACGCTTTCGTGCATGAGCGTCAGTGTTATCCCATTG10.23364485981308408No Hit
CCTGTTCGCTCCCCACGCTTTCGCTCCTCAGCGTCAGTAACGCCCCAGTA10.23364485981308408No Hit
CCTGTTTGCTCCCCATGCTTTCGTACCTCAGCGTCAGTATTAGTCCAGAT10.23364485981308408No Hit
CCTGTTTGATCCCCACACTTTCGCTCCTCAGCGTCAGTTGCAGCCCGGAC10.23364485981308408No Hit
CCTGTTTGCTCCCCACGCTTTCGATCCTCAGCGTCAGTTACAGACCAGAG10.23364485981308408No Hit
CCTGTTCGCTCCCCACGCTTTCGATCCTCAGCGTCAGTTACAGACCAGAG10.23364485981308408No Hit
CCTGTTCGATCCCCGCACTTTCGTGCCTCAGCGTCATTTGCGCGCCTGCC10.23364485981308408No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAACGTCAGTAACGGCCCAGAG10.23364485981308408No Hit
CCTGTTTGCTACCCACACTTTCGTGCCTCAGCGTCAGTTAAAGCCCAGTA10.23364485981308408No Hit
CCTGTTTGCTCCCCACGCTTTCGCGCCTCAGCGTCAGTTGTCGTCCAGCA10.23364485981308408No Hit
CCTGTTTGATCCCCGCACTTTCGAGCCTCAGCGTCAGTTACAGTCTCGTG10.23364485981308408No Hit
CCCGTTCGCTCCCCTGGCTTTCGAGCCTCAGCGTCAGTTGCAGTCCAGAA10.23364485981308408No Hit
CCTGTTTGCTCCCCACGCTTTCGCGCCTCAGCGTCAGTTGCGGACCAGAG10.23364485981308408No Hit

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAGTCCA106.911665E-4259.66666195
ATCCCCG100.0019315424194.759
GTTTGCT151.566951E-5194.754
GTTTGAT100.0019315424194.754
CCTGTTT201.016906E-7194.751
CCTGTTC100.0019315424194.751
TGATCCC100.0019315424194.757
TGTTTGC151.566951E-5194.753
TGTTTGA100.0019315424194.753
GCTACCC151.566951E-5194.758
GATCCCC100.0019315424194.758
TTGATCC100.0019315424194.756
TGCTACC100.0019315424194.757
CTGTTTG254.984031E-10194.752
GCTCCCC100.0019315424194.758
CTGTTCG100.0019315424194.752
TTTGCTA100.0019315424194.755
CTACCCA151.566951E-5194.759
TTGCTAC100.0019315424194.756
GTTCGCT100.0019315424194.754