FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005301913

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005301913
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences450
Sequences flagged as poor quality0
Sequence length199-201
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TACGTAGGTCCCGAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCA398.666666666666668No Hit
GACGAAGGATGCAAGCGTTATCCGGATTCATTGGGTTTAAAGGGAGCGTA347.555555555555555No Hit
TACGTAGGTGGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGCGCGCGCA306.666666666666667No Hit
TACGTAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCA235.111111111111112No Hit
TACGTAGGTGGCAAGCGTTATCCGGAATTATTGGGCGTAAAGCGCGCGTA184.0No Hit
TACGTAGGTGGCAAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCA173.7777777777777777No Hit
TACGGAGGGTGCAAGCGTTGTCCGGATTTATTGGGTTTAAAGGGTGCGTA132.888888888888889No Hit
TACGTAGGGCGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCTTGTA122.666666666666667No Hit
TACGGAAGGTCCGGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA122.666666666666667No Hit
TACGGAGGGAGCTAGCGTTATTCGGAATTACTGGGCGTAAAGCGCACGTA112.4444444444444446No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTA102.2222222222222223No Hit
TACGTAGGGCGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGGGCTTGTA92.0No Hit
TACGAAGGGGGCTAGCGTTGCTCGGAATTACTGGGCGTAAAGGGAGCGTA92.0No Hit
TACGTAGGGTGCAAGCGTTGTCCGGATTTACTGGGCGTAAAGAGCTCGTA81.7777777777777777No Hit
TACGGAGGGGGCTAGCGTTGTTCGGAATTACTGGGCGTAAAGCGCACGTA71.5555555555555556No Hit
TACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGGGTGCGTA71.5555555555555556No Hit
TACGTAGGTCCCGAGCGTTATCCGGATTTATTGGGCGTAAAGCGAGCGCA61.3333333333333335No Hit
TACGGAGGGAGCTAGCGTTGTTCGGAATTACTGGGCGTAAAGCGCACGTA61.3333333333333335No Hit
TACGTAGGGCGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCTCGTA61.3333333333333335No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGCA51.1111111111111112No Hit
TACGGAAGGTCCAGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA51.1111111111111112No Hit
TACGAAGGGGGCTAGCGTTGCTCGGAATCACTGGGCGTAAAGGGCGCGTA40.8888888888888888No Hit
TACGTATGTCGCAAGCGTTATCCGGAATTATTGGGCATAAAGGGCATCTA40.8888888888888888No Hit
TACGTATGGTGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGCA40.8888888888888888No Hit
TACGGAGGATCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA40.8888888888888888No Hit
GACGGGGGGGGCAAGTGTTCTTCGGAATGACTAGGCGTAAAGGGCACGTA30.6666666666666667No Hit
TACGGAGGATCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTA30.6666666666666667No Hit
TACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCACGCA30.6666666666666667No Hit
TACGTAGGTCCCGAGCGTTGTCCGGATTTATTGGGCGTAAAGCGTGCGCA30.6666666666666667No Hit
AACGTAGGTCACAAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGCA30.6666666666666667No Hit
TACGTAGGGTGCGAGCGTTATCCGGAATTATTGGGCGTAAAGAGCTCGTA30.6666666666666667No Hit
TACGTAGGTGGCAAGCGTTATCCGGATTTATTGGGCGTAAAGCGAGCGCA30.6666666666666667No Hit
TACGAAGGGGGCTAGCGTTGCTCGGAATTACTGGGCGTAAAGGGCGCGTA30.6666666666666667No Hit
TACAGAGGGTGCAAGCGTTAATCGGATTTACTGGGCGTAAAGCGCGCGTA30.6666666666666667No Hit
TACGTAGGGTGCGAGCGTTGTCCGGAATTACTGGGCGTAAAGGGCTCGTA30.6666666666666667No Hit
TACAGAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGAGTGTA30.6666666666666667No Hit
TACAGAGGGTGCGAGCGTTAATCGGATTTACTGGGCGTAAAGCGTGCGTA20.4444444444444444No Hit
TACGGAGGATGCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTA20.4444444444444444No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.4444444444444444No Hit
TACGTAGGGTGCAAGCGTTATCCGGAATTATTGGGCGTAAAGGGCTCGTA20.4444444444444444No Hit
TACGTAGGGGGCGAGCGTTATCCGGATTCATTGGGCGTAAAGCGCGCGTA20.4444444444444444No Hit
TACGTAGGGCGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGCGCTTGCA20.4444444444444444No Hit
TACGGAGGTTCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA20.4444444444444444No Hit
TACGTAGGTGGCAAGCGTTGTCCGGATTTACTGGGTGTAAAGGGCGTGTA20.4444444444444444No Hit
TACGTAGGTGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGCGTGTA20.4444444444444444No Hit
TACGGAGGGTGCAAGCGTTGTCCGGATTTATTGGGTTTAAAGGGTGCGCA20.4444444444444444No Hit
AACGTAGGGTGCAAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGCA20.4444444444444444No Hit
TACGTAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGAGCGCA20.4444444444444444No Hit
TACGAGTGGTGCAAGCGTTATTCGGATTTATTGGGCGTAAAGGGTGCGCA20.4444444444444444No Hit
AATCGCACCAAACATACCTCACCTCACTTAAGTGCCTGGAGCCAAATAAT10.2222222222222222No Hit
TACGGAGGGTGCGAGCGTTAATCGGAATAACTGGGCGTAAAGGGCACGCA10.2222222222222222No Hit
TACGTAGGGCGCGAGCGTTTTCCGGAATTATTGGGCGTAAAGTGCTTGTA10.2222222222222222No Hit
TACGGCAGGTCCGGGCGTTATCCGGATTTATTGGGTTTCAATGGATCGTA10.2222222222222222No Hit
TACGTAGGTCGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGCGCGCGCA10.2222222222222222No Hit
TACGGAAGGTCCAGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGTGTA10.2222222222222222No Hit
TACGTAGGTGGCAAGCGTTGTCCGGAATTACTGGGCGTAAAGGGCGCGCA10.2222222222222222No Hit
TACGTAGGTCCCGAGCGTTGTCCGGATTTACTGGGCGTAAAGCGAGCGCA10.2222222222222222No Hit
TACGTAGGGAGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGTGCGTA10.2222222222222222No Hit
TACGTAGGTGGCAAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGCA10.2222222222222222No Hit
TACGTAGGTCGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCTTGTA10.2222222222222222No Hit
TACGGAGGGTGCTAGCGTTGTTCGGAATTACTGGGCGTAAAGCGCACGTA10.2222222222222222No Hit
TACGGATGATGCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTA10.2222222222222222No Hit
AAAAGAGCTTACTAAAATGCAACTGGACAATCAGAAAGAGATTGCCGAGA10.2222222222222222No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGCGGGGGGGG10.2222222222222222No Hit
TACGTAGGTGGCAAGCGTTATCCGGATTTATTGGGCGTAAAGCGCGCGTA10.2222222222222222No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGTGGGG10.2222222222222222No Hit
TACGTAGGTCGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGGGCTTGTA10.2222222222222222No Hit
TACGTAGGTCGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGGGCTCGCA10.2222222222222222No Hit
TACGGAAGGTCCGGGCGTTATCCGGAATTATTGGGTTTAAAGGGAGCGCA10.2222222222222222No Hit
TACGGAAGGTCCGGGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTA10.2222222222222222No Hit
TACGTAGGTGGCAAGCGTTGTCCGGAATTATTGCGCGTAAAGCTCGCGCA10.2222222222222222No Hit
TACGTAGGGCGCGAGCGTTAATCGGAATTACTGGGCGTAAAGAGATCGCA10.2222222222222222No Hit
TACGTAGGTGGCGAGCGTTATCCGGAATTATTGGGCGTAAAGGGTGCGTA10.2222222222222222No Hit
TTTCATAGTGTAGGCCTCCAGCAATCTTGAACACTCCTCCTTTATACCTT10.2222222222222222No Hit
ATCTGTCCACGGAGTGCTTAATCCAACTTACCAAGCTGGGTTACGACGCG10.2222222222222222No Hit
TACGTAGGTGGCAAGCGTTATCCGGATTTATTGGGCGTAAAGCGAGCGTA10.2222222222222222No Hit
TACGGAGGTGGCAAGCGTTGTCCGGATTTATTGGGCGTAAAGGGCTTGTA10.2222222222222222No Hit
GACGAAGGATGCAAGCGTTATCCGGATTCGTTGGGTTTAAAGGGAGCGTA10.2222222222222222No Hit
TACGTAGGGTGCAAGCGTTACTCGGAATTACTGGGCGTAAAGCGTGCGCA10.2222222222222222No Hit
TACGTATGGTGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTA10.2222222222222222No Hit
TACAGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCGCGTA10.2222222222222222No Hit
TACGGAGGGTGCGAGCGTTAATCGGAATAACTGGGCGTAATGGGCACGCA10.2222222222222222No Hit
TACAGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCGCGCA10.2222222222222222No Hit
TACGTAGGTGGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGGGCGCGCA10.2222222222222222No Hit
TACGTAGGTCCCGAGCGTTGTCCGGATTTATTGGGCGGAAAGCGAGCGCA10.2222222222222222No Hit
TACGGAGGATGCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGCA10.2222222222222222No Hit
TTCAAACTGGCGCCGAGCGTATGCCGCCTGACCTTTCCCATCTTGGCTTC10.2222222222222222No Hit
TCCGGCTGACTGACTCAGCCTCGATCTCGTATGCCGTCTTCTGCTTGAAA10.2222222222222222TruSeq Adapter, Index 1 (96% over 28bp)
TACGTAGGGCGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGCGCTTGTA10.2222222222222222No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGGGCT10.2222222222222222No Hit
TACGAAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCGCGTA10.2222222222222222No Hit
TACGTAGGGGGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGGGCGCGTA10.2222222222222222No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGTGTAACGGGAGCGTA10.2222222222222222No Hit
TACGGAGGTCCCGAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCA10.2222222222222222No Hit
ATCTTTTATCACGAAGTCATGATTGAATCGCGAGTGGTCGGCAGATTGCG10.2222222222222222No Hit
TACGTAGGGAGCGAGCGTTATCCGGATTCATTGGGCGTAAAGCGCGCGTA10.2222222222222222No Hit
TACGTAGGGTGCAAGCGTTGTCCGGAATTACTGGGCGTAAAGAGCTCGTA10.2222222222222222No Hit
GTCACACAGTCCTTGACGGTATAATAACCACCATCATGGCGACCATCCAA10.2222222222222222No Hit
TACGTAGGGCGCAAGCGTTGTCCGGAATTATTGGGCGTAATGAGCTCGTA10.2222222222222222No Hit
TACGTAGGGAGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGCGCGTA10.2222222222222222No Hit
AACGTAGGTCACAAGCGTTGTCCGGAATTACTGGGCGTAAACGGAGCGCA10.2222222222222222No Hit
GTAACAGAAGTGAGAACCAGCTTCTCAGAAAACAAGTTTGAATTATGGCG10.2222222222222222No Hit
TACGAAGGGTGCGAGCGTTATCCGGAATTACTGGGCGTAAAGAGCGCGTA10.2222222222222222No Hit
TACGGAGGATGCGAGCGTTATCCGGAATTATTGGGTGTAAAGGGAGCGTA10.2222222222222222No Hit
TACGTAGGTGGCGAGCGTTATCCGGAATTATTGGGCGTAAAGAGCGCGCA10.2222222222222222No Hit
TACGGAGGTGGCAAGCGTTATCCGGAATTACTGGGTGTAAAGGGTGCGTA10.2222222222222222No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCGGGCGGGTG10.2222222222222222No Hit
TACGTAGGTCCCGAGCGTTGTCCGGATTTATTGGGCGTAAAGCGCGCGCA10.2222222222222222No Hit
TACGTAGGTGGCAAGCGTTGTCCGGATTTACTGGGTGTAAAGGGAGCGCA10.2222222222222222No Hit
TACGGAGGGTGCAAGCGTTAATCGGATTTACTGGGCGTAAAGCGCGCGTA10.2222222222222222No Hit
TACGGAGGGTGCGAGCGTTTTTCGGAATTATTGGGCGTAAAGGGCTCGTA10.2222222222222222No Hit
TACGTAGGGGGCAAGCGTTATCCGGAATTACTGGGCGTAAAGCGCGCGTA10.2222222222222222No Hit
TACGGAAGGTCCGGGCGTTATCCGGATTTATTGGGTTTAAAGTGAGCGTA10.2222222222222222No Hit
TACGTAGGGAGCGAGCGTTGTCCGGAATTACTGGGCGTAAAGGGTGCGTA10.2222222222222222No Hit
TACGTAGGTCCCGAGCGTTGTCCGGATTTATTGGGCGTACAGCGAGCGCA10.2222222222222222No Hit
TACGTATGGCGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGCA10.2222222222222222No Hit
TACGTAGGTGGCAAGCGTTGTCCGGAATTATTGGGCGCAAAGCGCGCGCA10.2222222222222222No Hit
TACGTAGGGTGCGAGCGTTATCCGGAATTATTGGGCGTAAAGCGCTCGTA10.2222222222222222No Hit
TACGGAAGGTCCGGGCGTTATCCGGATTTATTGGGCTTAAAGGGAGCGTA10.2222222222222222No Hit
TACGTAGGTGCCAAGCGTTGTCCGGAATTATTGGGCGTAAAGCGAGCGCA10.2222222222222222No Hit
TACGTAGGTGGCGAGCGTTATCCGGAATGATTGGGCGTAAAGGGTGCGTA10.2222222222222222No Hit
TACGTATGTCGCAAGCGTTATCCGGAATTATTGGGCTTAAAGGGCATCTA10.2222222222222222No Hit
TACGGAAGGTCCAGGCGTTATCCGGATTTATTGGGGTTAATGGGTGCGTA10.2222222222222222No Hit
TACGTATGGTGCAAGCTTTATCCGGATTTACTGGGTGTAAAGGGAGCGTA10.2222222222222222No Hit
TACGTAGGGGGCAAGCGTTGTCCGGAATAATTGGGCGTAAAGGGCGCGTA10.2222222222222222No Hit
TACGTAGGTGGCGAGCGTTATCCGGATTTACTGGGCGTAAAGGGAGCGCA10.2222222222222222No Hit
TACGTATGTCACAAGCGTTATCCGGATTTATTGGGCGTAAAGCGCGTCTA10.2222222222222222No Hit
TACGTAGGGAGCAAGCGTTGTCCGGATTTACTGGGTGTAAAGGGTGCGTA10.2222222222222222No Hit
TACGGAGGATTCAAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTA10.2222222222222222No Hit
TACGGAAGGTCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA10.2222222222222222No Hit
AACGTAGGTCACAAGCGTTGTCCGGAATTACTGGGTGTAAAGGGCGCGCA10.2222222222222222No Hit
TACGGAAGGTCCAGGCGTTATCCGGATTTATTGGGCTTAAAGGGCGCGCA10.2222222222222222No Hit
TACGTAGGTGGCGAGCGTTGTCCGGAATCATTGGGCGTAAAGGGAGCGCA10.2222222222222222No Hit
TACGTAGGTGGCAAGCGTTGTCCGGAATTACTGGGCGTAAAGGGTGCGTA10.2222222222222222No Hit
TACGGAGGGGGCTAGCGTTGTTCGGAATTACTGGGCGTAAAGCGCACGCA10.2222222222222222No Hit
TACGGAAGGTGCAAGCGTTATCCGGATTTATTGGGTGTAAAGGGAGCGTA10.2222222222222222No Hit
TACGGAAGGTCCAGGCGTTATCCGGATTTATTGGGTTTAAAGGGCGCGTA10.2222222222222222No Hit

[OK]Adapter Content

Adapter graph