FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005301915

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005301915
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences983
Sequences flagged as poor quality0
Sequence length199-201
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TACGTAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCA25626.042726347914545No Hit
TACGTAGGTCCCGAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCA21421.770091556459818No Hit
TACGGAGGGTGCGAGCGTTAATCGGAATAACTGGGCGTAAAGGGCACGCA10210.376398779247202No Hit
TACGTAGGTGGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGCGCGCGCA767.731434384537131No Hit
TACGTATGTCACAAGCGTTATCCGGATTTATTGGGCGTAAAGCGCGTCTA474.781281790437437No Hit
TACGGAGGATGCGAGCGTTATCCGGAATCATTGGGTTTAAAGGGTCCGTA343.458799593082401No Hit
TACGGAAGGTCCAGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA313.1536113936927768No Hit
TACGTAGGGTGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCTCGTA202.034587995930824No Hit
TACGAAGGGGGCTAGCGTTGCTCGGAATCACTGGGCGTAAAGGGCGCGTA131.3224821973550356No Hit
TACAGAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGAGTGTA131.3224821973550356No Hit
GACAGAGGATGCAAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTA101.017293997965412No Hit
TACGTAGGGCGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGGGCTTGTA90.9155645981688708No Hit
TACGTAGGGCGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCTTGTA80.8138351983723295No Hit
TACGTAGGTGGCAAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCA70.7121057985757884No Hit
TACAGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCGCGTA70.7121057985757884No Hit
TACGTAGGTCCCGAGCGTTATCCGGATTTATTGGGCGTAAAGCGAGCGCA60.6103763987792472No Hit
TACGTAGGGCGCAAGCGTTATCCGGAATTATTGGGCGTAAAGAGCTCGTA60.6103763987792472No Hit
TACGTAGGGCGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCTCGTA60.6103763987792472No Hit
TACGGAAGGTCCGGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA60.6103763987792472No Hit
TACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCACGCA50.508646998982706No Hit
TACGGAGGGGGCTAGCGTTGTTCGGAATTACTGGGCGTAAAGCGCACGTA40.40691759918616477No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTA40.40691759918616477No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGCA40.40691759918616477No Hit
TACGTAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGAGCGCA40.40691759918616477No Hit
GACGGGGGGGGCAAGTGTTCTTCGGAATGACTGGGCGTAAAGGGCACGTA40.40691759918616477No Hit
TACGGGGGGTGCGAGCGTTAATCGGAATAACTGGGCGTAAAGGGCACGCA40.40691759918616477No Hit
TACGAAGGGGGCTAGCGTTGCTCGGAATGACTGGGCGTAAAGGGCGCGTA40.40691759918616477No Hit
TACGGAGGATCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTA30.3051881993896236No Hit
TACGTGAGGTGCAAACGTTACCCGGAATTATTGGGCGTAAAGCGTCCGCA30.3051881993896236No Hit
TACGTAGGTGGCAAGCGTTATCCGGAATTATTGGGCGTAAAGCGCGCGTA30.3051881993896236No Hit
TACGTAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGAGCGCA30.3051881993896236No Hit
TACAGAGGGTGCGAGCGTTAATCGGATTTACTGGGCGTAAAGCGTGCGTA20.20345879959308238No Hit
TACGGAAGGTCCAGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGTGTA20.20345879959308238No Hit
TACGTAGGTGGCAAGCGTTGTCCGGATTTATTGGGCGTAAAGCGCGCGTA20.20345879959308238No Hit
TACGGAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGGGCACGCA20.20345879959308238No Hit
AACGTAGGTCACAAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGCA20.20345879959308238No Hit
TACGTAGGGTGCGAGCGTTGTCCGGATTTATTGGGCGTAAAGGGCTCGTA20.20345879959308238No Hit
TACGGAAGGTCCGGGCGTTATCCGGATTTATTGGGCTTAAAGGGAGCGTA20.20345879959308238No Hit
TACGTAGGGTGCAAGCGTTAATCGGATTTACTGGGCGTAAAGCGTGCGCA20.20345879959308238No Hit
TACGGAGGGTGCGAGCGTTAATCGGAATCACTGGGCGTAAAGGGCACGCA20.20345879959308238No Hit
TACGTAGGGTGCAAGCGTTGTCCGGAATTACTGGGCGTAAAGAGCTCGTA10.10172939979654119No Hit
TACGTAGGTCCCGAGCGTTGTCCGGATCTATTGGGCGTAAAGCGAGCGCA10.10172939979654119No Hit
TACGTAGTGCGCAAGCGTTATCCGGAATTATTGGGCGTAAAGAGCTCGTC10.10172939979654119No Hit
TACGTAGGTCCCGAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCG10.10172939979654119No Hit
TACGTAGGTCCCGAGCGTTGTCTGGATTTATTGGGCGTAAAGCGAGCGCA10.10172939979654119No Hit
TACGTATGTCGCAAGCGTTATCCGGAATTATTGGGCATAAAGGGCATCTA10.10172939979654119No Hit
TTACCAGCATTAACCGTCAAACTATCAAAATATAACGTTGACGATGTAGC10.10172939979654119No Hit
TACGGAGGATGCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTA10.10172939979654119No Hit
TACGTAGGTGGCAAGCGTTGTCCGGATTTATTGGGCGTAAAGCGCGCGCA10.10172939979654119No Hit
TACGTAGGGCGCGAGCGTTTTCCGGAATTATTGGGCGTAAAGGGCTTGTA10.10172939979654119No Hit
TACGTAGGGTGCAAGCGTTATCCGGAATTATTGGGCGTAAAGGGCTCGCA10.10172939979654119No Hit
TACGTAGGTGGCAAGCGTTGTCCGGATTTATTGGGCGCAAAGCGAGCGCA10.10172939979654119No Hit
TACGGAGGGTGCAAGCGTTACTCGGAATCACTGGGCGTAAAGGACGCGTA10.10172939979654119No Hit
TACGTAGGTCCCGATCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCA10.10172939979654119No Hit
TACCATGATGTTATTTCTTCATTTGGAGGTAAACCCTCTTATGACGCTGA10.10172939979654119No Hit
TACGTAGGTCCCGAGCGTTGTCCGGATTTATTGGGCGTAAAGAGCGCGCA10.10172939979654119No Hit
TACGTAGGGTGCAAGCGTTATCCGGAATTATTGGGCGTAAAGGGCTCGTA10.10172939979654119No Hit
TACGTAGAAGACTAGTGTTATTCATCTTTAATAGGTTTAAAGGGTACCTA10.10172939979654119No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGCGTAAAGGGAGCGCA10.10172939979654119No Hit
TACGTAGTTCCCGAGCGTTGTCCGGAATTATTGGGCGTAAAGCGCGCGCA10.10172939979654119No Hit
TACGTAGGGTGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCTCGTA10.10172939979654119No Hit
TACGGAGGATCCGAGCGTTATCCGGATTTATTGGGCTTAAAGGGCGCGTA10.10172939979654119No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGCGTAAAGGGAGCGTA10.10172939979654119No Hit
TACGTAGGTTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCA10.10172939979654119No Hit
TACGTAGGGTGCGAGCGTTGTCCGGATTTATTGGGCGTAAAGGGCTCCTA10.10172939979654119No Hit
TACGGAGGATCCGAGCGTTATCCGGATTTATTGGGCTTAAAGGGCGCGCA10.10172939979654119No Hit
TACGTATGTCGCGAGCGTTATCCGGAATTATTGGGCATAAAGGGCATCTA10.10172939979654119No Hit
TACGGAGGGTGCAAGCGTTACTCGGAATCACTGGGCGTAAAGGGAGCGTA10.10172939979654119No Hit
TACGTAGGGTGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGGGCTCGTA10.10172939979654119No Hit
TACGTAGGGGGCAAGCGTTATCCGAATTTACTGGGTGTAAAGGGAGCGTA10.10172939979654119No Hit
TACAGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCGCGCA10.10172939979654119No Hit
TACGTAGGTCCCGGGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCA10.10172939979654119No Hit
TACGGAAGGTCCAGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGTGCA10.10172939979654119No Hit
TATGTAGGTCCCGAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCA10.10172939979654119No Hit
TACGTAGGTCCCGAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGCA10.10172939979654119No Hit
TACGTAGGGCGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCTCGTA10.10172939979654119No Hit
TACGGAAGGTCCAGGCGTTATCCGGATTTATTGGGCTTAAAGGGAGCGTA10.10172939979654119No Hit
TACGTAGGGCCCGAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCA10.10172939979654119No Hit
TACGAAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCA10.10172939979654119No Hit
TACGTAGGTCGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCGCGCA10.10172939979654119No Hit
TACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGGGCGCGTA10.10172939979654119No Hit
TACGTAGGGCGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGCGCTTGTA10.10172939979654119No Hit
TACGTAGGTGGCAAGCGTTATCCGGAATTACTGGGCGTAAAGGGCGCGTA10.10172939979654119No Hit
TACGTAGGTGGCGAGCGTTGTCCGGAATCATTGGGCGTAAAGGGAGCGCA10.10172939979654119No Hit
TACGAAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCGCGTA10.10172939979654119No Hit
AGAATCTCTACCATGAACAAAATGTGACTCATATCTAAACCAGTCCGTGA10.10172939979654119No Hit
TACGGAGGTTCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA10.10172939979654119No Hit
TACGGAGGTCCCGAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCA10.10172939979654119No Hit
TACGTAGGTGGCAAGCGTTATCCGGATTTATTGGGCGTAAAGCGAGCGCA10.10172939979654119No Hit

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAGGCGG102.1771478E-4410.55554195
AAGGCAG302.5465852E-11342.12964195
GTATGTC252.6884663E-9194.47374
GTCACAA252.6884663E-9194.47378
TATGTCA252.6884663E-9194.47375
ACGTATG252.6884663E-9194.47372
ACGTAGG350.0194.47372
TGTCACA252.6884663E-9194.47377
TACGTAT252.6884663E-9194.47371
TACGTAG350.0194.47371
CGTATGT252.6884663E-9194.47373
ATGTCAC252.6884663E-9194.47376
TCACAAG252.6884663E-9194.47379
GGATGCA100.0025013215194.473687
TGGCAAG100.0025013215194.473689
CGGAGGG100.0025013215194.473683
GAGGATG152.7327449E-5194.473685
ACAGAGG152.7327449E-5194.473682
GACAGAG100.0025013215194.473681
AGGATGC152.7327449E-5194.473686