FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005301939

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005301939
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences517
Sequences flagged as poor quality0
Sequence length199-201
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACGAAGGATGCAAGCGTTATCCGGATTCATTGGGTTTAAAGGGAGCGTA7915.28046421663443No Hit
TACGTAGGTCCCGAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCA6011.60541586073501No Hit
TACGTAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCA499.477756286266924No Hit
TACGGAAGGTCCAGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGCA244.642166344294004No Hit
TACGTAGGTGGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGCGCGCGCA183.481624758220503No Hit
TACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCACGCA152.9013539651837523No Hit
TACGGAGGGTGCAAGCGTTGTCCGGATTTATTGGGTTTAAAGGGTGCGCA152.9013539651837523No Hit
TACGTAGGGCGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGGGCTTGTA112.127659574468085No Hit
TACGGAGGGTGCGAGCGTTAATCGGAATAACTGGGCGTAAAGGGCACGCA101.9342359767891684No Hit
GACAGAGGGTGCAAACGTTGTTCGGAATTACTGGGCGTAAAGCGCGTGTA101.9342359767891684No Hit
TACGGAAGGTCCGGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA91.7408123791102514No Hit
TACGTAGGTGGCAAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCA81.5473887814313347No Hit
TACGTAGGTCCCGAGCGTTATCCGGATTTATTGGGCGTAAAGCGAGCGCA81.5473887814313347No Hit
TACGAAGGGGGCTAGCGTTGCTCGGAATGACTGGGCGTAAAGGGCGCGTA81.5473887814313347No Hit
GACAGAGGATGCAAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTA81.5473887814313347No Hit
TACAGAGGGTGCGAGCGTTAATCGGATTTACTGGGCGTAAAGCGTGCGTA71.3539651837524178No Hit
TACAGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCGCGTA71.3539651837524178No Hit
TACGTAGGTGGCAAGCGTTATCCGGAATTATTGGGCGTAAAGCGCGCGTA71.3539651837524178No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTA61.160541586073501No Hit
TACGAAGGGGGCTAGCGTTGCTCGGAATTACTGGGCGTAAAGGGCGCGTA61.160541586073501No Hit
TACGTATGTCGCGAGCGTTATCCGGAATTATTGGGCATAAAGGGCATCTA50.9671179883945842No Hit
TACGGAAGGTCCAGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA50.9671179883945842No Hit
TACGTAGGGTGCAAGCGTTATCCGGAATTATTGGGCGTAAAGGGCTCGTA40.7736943907156674No Hit
TACCAGCACCCCGAGTGGTCGGGACGATTATTGGGCCTAAAGCATCCGTA40.7736943907156674No Hit
TACGTAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGAGCGCA40.7736943907156674No Hit
TACGTAGGGCGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCTCGTA40.7736943907156674No Hit
TACGTAGGGCGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCTTGTA40.7736943907156674No Hit
TACGTAGGTGGCAAGCGTTGTCCGGATTTATTGGGCGTAAAGCGCGCGCA30.5802707930367506No Hit
TACGTAGGGTGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCTTGTA30.5802707930367506No Hit
TACGTAGGGTGCAAGCGTTGTCCGGAATTACTGGGCGTAAAGAGCTCGTA30.5802707930367506No Hit
TACGGAAGGTCCAGGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTA20.3868471953578337No Hit
TACGGAGGATCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTA20.3868471953578337No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGCA20.3868471953578337No Hit
TACGTAGGGTGCGAGCGTTGTCCGGAATTACTGGGCGTAAAGAGCTCGTA20.3868471953578337No Hit
TACGTAGGTCCCGAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCTCA20.3868471953578337No Hit
TACGAGGGATCCTAGCGTTGTTCGGAATCATTGGGCGTAAAGAGTATGTA20.3868471953578337No Hit
TACGTAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGAGCGCA20.3868471953578337No Hit
TACGTAGGTGGCAAGCGTTATCCGGAATTATTGGGCGTAAAGCGCGCGCA20.3868471953578337No Hit
TACGTAGGTCGCGAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCA20.3868471953578337No Hit
TACGGAGGATCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA20.3868471953578337No Hit
TACGGAGGGAGCTAGCGTTGTTCGGAATTACTGGGCGTAAAGCGTACGTA20.3868471953578337No Hit
TACGTAGGTGGCGAGCGTTGTCCGGAATCATTGGGCGTAAAGGGAGCGCA20.3868471953578337No Hit
TACGGAAGGTCCGGGCGTTATCCGGATTTATTGGGCTTAAAGCGAGTGTA10.19342359767891684No Hit
TACGGAGGATCCGAGCGTTATCCGGATTTATTGGGCTTAAAGCGAGCGTA10.19342359767891684No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGCGTAAAGGGCGCGTA10.19342359767891684No Hit
TACAGAGGGTGCGAGCGTTATTCGGATTTACTGGGCGTAAAGCGTGCGTA10.19342359767891684No Hit
TACGTATGTCGCGAGCGTTATCCGGAATTATTGGCCATAAAGGGCTTCTA10.19342359767891684No Hit
ATAGGAGTGGCATTAACACCATCCTTCATGAACTTAATCCACTGTTCACC10.19342359767891684No Hit
TACGTATGTCGCAAGCGTTATCCGGAATTATTGGGCATAAAGGGCATCTA10.19342359767891684No Hit
TACGTAGGTGGCGAGCGTTGTCCGGATTTATTGGGCGTAAAGGGAGCGCA10.19342359767891684No Hit
TACGGAGGATGCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTA10.19342359767891684No Hit
TACGGAAGTTCCGGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA10.19342359767891684No Hit
AAAATACGTGGCCTTATGGTTACAGTATGCCCATCGCAGTTCGCTACACG10.19342359767891684No Hit
TACGTAGGGAGCGAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGTA10.19342359767891684No Hit
ACTTCTGCCGTTTCTGATAAGTTGCTTGATTTGGTTGGACTTGGTGGCAA10.19342359767891684No Hit
ACATCATAGGCAGTCGGCAGGGTAGTCGGAACCGAAGAAGTCTCAAAGCG10.19342359767891684No Hit
AATAACACTATAGACCACCGCCCCGAAGGGGACGAAAAATTGTTTTTAGA10.19342359767891684No Hit
TACGTAGGTGGCAAGCGTTGTCCGGATTTATTGGGCGTAAAGCGCGCGTA10.19342359767891684No Hit
CCACACCAGAAGCAGCATCAGTGACGACATTAGAAATATCCTTTGCAGTA10.19342359767891684No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10.19342359767891684No Hit
TACGGAGGGTGCAAGCGTTACTCGGAATCACTGGGCGTAAAGGACGCGTA10.19342359767891684No Hit
CTGTTCACCATAAACGTGACGATGAGGGCCATAAAAAGTAAAAATGTCTA10.19342359767891684No Hit
TACGTAGGTCCCGAGCGTTGTCCGGATTTATTGGGCGTAAATCGAGCGCA10.19342359767891684No Hit
TACGTAGGTCGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCTCGTA10.19342359767891684No Hit
TACGTAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGAGCGTA10.19342359767891684No Hit
AACGTAGGTCACAAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGCA10.19342359767891684No Hit
TACGTAGGGGGCGAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTA10.19342359767891684No Hit
TACGTATGTCGCGAGCGTTATCCGGAATTATTGGGCCTAAAGGGCATCTA10.19342359767891684No Hit
TACAGAGGGTGCAAGCGTTGTTCGGAATTATTGGGCGTAAAGGGCGCGTA10.19342359767891684No Hit
ATCCCTAAGCATTTGTTTCAGGGTTATTTGAATATCTATAACAACTATTT10.19342359767891684No Hit
TACGTATGTCGCGAGCGTTATCCGGAATTATTGGGCATAAAGCGCATCTA10.19342359767891684No Hit
TACGTAGGTGGCAAGCGTTGTCCGGATTTACTGGGCGTAAAGCGAGCGCA10.19342359767891684No Hit
TACGGAAGGTCCATGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA10.19342359767891684No Hit
TACGTAGGTCGCGAGCGTTGTCCGGATTTATTGGGCGTAAAGCGCGTGCA10.19342359767891684No Hit
TCAGGCTTCTGCCGTTTTGGATTTAACCGAAGATGATTTCGATTTTCTGA10.19342359767891684No Hit
TACGTAGGTGGCAAGCGTTGTCCGGATTTACTGGGCGTAAAGCGCGTGTA10.19342359767891684No Hit
TTTTTGCAGCTGAGGGGTTGACCAAGCGAAGCGCGGTAGGTTTTCTGCTT10.19342359767891684No Hit
TACGTAGGTGGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGGGCGCGCA10.19342359767891684No Hit
TACGTAGGATGCGAGCGTTATCCGGATTTATTGGGCGTAAAGCGAGCGCA10.19342359767891684No Hit
TACGTAGGTCCCGAGCGTTGTCCGGATTTATTGGGCGTAAAGAGATCGCA10.19342359767891684No Hit
TACGGAGGATGCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGCA10.19342359767891684No Hit
TACGGAGGGCGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGGGCTTGTA10.19342359767891684No Hit
TACGTAGGGCGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGCGCTCGTA10.19342359767891684No Hit
TACGTATGTCACGAGCGTTATCCGGATTTATTGGGCGTAAAGCGCGTCTA10.19342359767891684No Hit
TACGTAGGTGGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGGGCGCGTA10.19342359767891684No Hit
AACATAGTGCCATGCTCAGGAACAAATAAACTCGGCACATAATGTTTATA10.19342359767891684No Hit
TTACGCTTGCCTTTAGTACCTCGCAACGGCTGCGGACGACCAGGTCGAGC10.19342359767891684No Hit
TACGTAGGTCCCGAGCGTTGTCCGGATTTATTGGGCGTAACGCGAGCGCA10.19342359767891684No Hit
TACGGAGGGGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGCA10.19342359767891684No Hit
TACGTAGGGAGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGCGCGCA10.19342359767891684No Hit
GGGGGGGGGGGGGGGGGGGGGGGCGGGGGGGGGGCGTGGGGTGGGGGGGG10.19342359767891684No Hit
TACGTAGGTGGCAAGCGTTATCCGGATTTATTGGGCGTAAAGCGAGCGCA10.19342359767891684No Hit
AAAACGACGTTTGGTCAGTTCCATCAACATCATAGCCAGATGCCCAGAGA10.19342359767891684No Hit
CACTAATAGGTAAGAAATCATGAGTCAAGTTACTGAACAATCCGTACGTT10.19342359767891684No Hit
TACGGAAGGTCCAGGCGTTATCCGGATTTATTGGGTTTAAAGGGATCGTA10.19342359767891684No Hit
TACGAAGGTCGCTAGCGTTGCTCGGAATTACTGGGCGTAAAGGGCGCGTA10.19342359767891684No Hit
TACGGAGGTTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCACGCA10.19342359767891684No Hit
TACGGAAGGTTCAGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA10.19342359767891684No Hit
TACGTAGGTGGCGAGCGTTGTCCGGATTTACTGGGCGTAAAGGGAGCGTA10.19342359767891684No Hit
TACGTAGGTGGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGGGCGCGCA10.19342359767891684No Hit
TACGTAGGTGGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGCGCGCGCA10.19342359767891684No Hit
TACGGAGGGCGCGAGCGTTAATCGGAATAACTGGGCGTAAAGGGCACGCA10.19342359767891684No Hit
TACGGAGGTGGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGCGCGCGCA10.19342359767891684No Hit
TACGTAGGTCCCGAGCGTTGTCCGGATTTATTGGGCGTAAAGCGCGTCTA10.19342359767891684No Hit
TACGGAGGGAGCTAGCGTTGTTCGGAATTACTGGGCGTAAAGCGCACGTA10.19342359767891684No Hit
TACGTAGGTCGCAAGCGTTGTCCGGATTTATTGGGCGTAAAGCGCTTGCA10.19342359767891684No Hit
TACGTAGGGTGCAAGCATTAATCGGAATTACTGGGCGTAAAGCGTGCGCA10.19342359767891684No Hit
TACGGAGGGTGCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGTTCGTA10.19342359767891684No Hit
TACGTAGGTGGCAAGCGTTGTCCGGAATTATTGGGCGTAAATCGCGCGCA10.19342359767891684No Hit
AACGTAGGGTGCAAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGCA10.19342359767891684No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGCGTAAAGGGAGCGTA10.19342359767891684No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCGTGGG10.19342359767891684No Hit
ACCTTTAGCATCAACAGGCAACAACCAACAAGAACGTGAAAAAGCGTCCT10.19342359767891684No Hit
GACGAAGGATGCAAGCGTTATCCGGATTCATTGGGTTTAAAGGGTGCGTA10.19342359767891684No Hit
TACGTAGGGGGCGAGCGTTATCCGGATTTATTGGGCGTAAAGCGTGTGTA10.19342359767891684No Hit
TACGTAGGGTGCGAGCGTTAATCGGATTTACTGGGCGTAAAGCGAGCGCA10.19342359767891684No Hit
TACGGAAGGTCCAGGCGTTATCCGGATTTATTGGGTTTATAGGGATCGTA10.19342359767891684No Hit
TACGTAGGTGGCGAGCGTTATCCGGAATGATTGGGCGTAAAGGGTGCGTA10.19342359767891684No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGTGCGTA10.19342359767891684No Hit
TACGTAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGGGCGCA10.19342359767891684No Hit
AATGTTCCTAACCCTGATGAGGCCGTCCCTAGTTTTGTTTCTGGTGCTAT10.19342359767891684No Hit
TACGTATGTCACAAGCGTTATCCGGATTTATTGGGCGTAAAGCGCGTCTA10.19342359767891684No Hit
TACGTAGGGAGCAAGCGTTGTCCGGATTTACTGGGTGTAAAGGGTGCGTA10.19342359767891684No Hit
GACGAAGGATGCAAGCGTTATCCGGATTCATTGGGCTTAAAGGGAGCGTA10.19342359767891684No Hit
GAATCATTAGCCTTGCGACCCTCGGCAGCAAGAACCATACGACCATTATC10.19342359767891684No Hit
TACGAAGGATGCAAGCGTTATCCGGATTCATTGGGTTTAAAGGGAGCGTA10.19342359767891684No Hit
AAAATGATTGGCGTATCCAACCTGCAGAGTTTTATCGCTTCCATGACGCA10.19342359767891684No Hit
TACGAGGGATCCTAGCGTTGTTCGGAATCATTGGGCGTAAAGCGTATGTA10.19342359767891684No Hit
TCAAAGTCAAAATAATCAGCGTGACATTCAGAAGGGTAATTAGAACGAAC10.19342359767891684No Hit
GGGGGGGGGGGGGGGGGGCGGGGGGCGGGGGGGTGGGGGGGCTGGGGGGG10.19342359767891684No Hit
GCACCAGAAACAAAACTAGGGACGGCCTCATCAGGGGTAGGAACATTAGA10.19342359767891684No Hit

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAGATAG109.906646E-4243.37502195
AAGGCAG109.906646E-4243.37502195
GTATGTC100.002119584194.700014
GTCGCGA100.002119584194.700018
TATGTCG100.002119584194.700015
ACGTATG100.002119584194.700012
TCGCGAG100.002119584194.700019
ACGTAGG100.002119584194.700012
AGGTGGC100.002119584194.700016
TACGTAT100.002119584194.700011
TACGTAG100.002119584194.700011
CGTATGT100.002119584194.700013
ATGTCGC100.002119584194.700016
ACGAAGG100.002119584194.700012
TGTCGCG100.002119584194.700017
TGGCAAG150.007134323129.799999
CGTAGGT150.007134323129.799993
GTAGGTG150.007134323129.799994
GGTGGCA150.007134323129.799997
GTGGCAA150.007134323129.799998