FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005301946

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005301946
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences137925
Sequences flagged as poor quality0
Sequence length197-201
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTGTTCGCTCCCCACGCTTTCGAGCCTCAGCGTCAGTTACAGACCAGAG6937550.29907558455683No Hit
CCTGTTCGCTCCCCATGCTTTCGCTTCTCAGCGTCAGTTACAGCCCAGAG122428.875838317926409No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAGCGTCAGTTACAGACCAGAG108567.870944353815479No Hit
CCTGTTTGCTCCCCACGCTTTCGCGCCTCAGTGTCAGTTACAGGCCAAAA35762.5927134312126157No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAGCGTCAGTTACAAGCCAGAG28002.030088816385717No Hit
CCTGTTCGCTACCCACGCTTTCGAGCCTCAGCGTCAGTGACAGACCAGAG27541.9967373572593803No Hit
CCTGTTCGCTCCCCACGCTTTCGAGCCTCAGCGTCAGATACAGACCAGAG27131.967011056733732No Hit
CCTGTTTGCTACCCACGCTTTCGCGCTTCAGCGTCAGTATCTGTCCAGTA25161.8241798078665943No Hit
CCCGTTCGCTCCCCTGGCTTTCGCGCCTCAGCGTCAGTTTTCGTCCAGAA21531.5609932934565887No Hit
CCTGTTTGATACCCACGCCTTCGTGCTTCAGTGTCAGTCGCAGTATGGCA13320.965742251223491No Hit
CCTGTTCGATACCCGCACCTTCGAGCCTCAGCGTCAGTTACGCTCCGGAT11830.8577125249229653No Hit
CCCATTCGCTCCCCTAGCTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCA9180.6655791190864601No Hit
CCTGTTCGCTACCCATGCTTTCGAGCCTCAGCGTCAGTTGCAGACCAGAG7960.5771252492296538No Hit
CCTGTTTGCTCCCCGCACCTTCGTATATCAGCGTCAATCATCGGCCAGAA7240.5249229653797354No Hit
CCTGTTCGCTACCCATGCTTTCGAGCCTCAGCGTCAGTTACAGACCAGAC6880.49882182345477616No Hit
CCTGTTTGCTACCCACGCTTTCGAACCTCAGCGTCAGTTACAGACCAGAG6530.4734457132499547No Hit
CCTGTTCGCTCCCCACGCTTTCGCGCCTCAGCGTCAGTTACAGACCAGAG6450.46764545948885267No Hit
CCTGTTCGATACCCGCACCTTCGAGCTTCAGCGTCAGTTGCGCTCCCGTC5090.3690411455501178No Hit
CCTGTTCGCTCCCCACGCTTTCGCTCCTCAGCGTCAGTAACGGCCCAGAG4770.3458401305057096No Hit
CCTGTTCGATACCCGCACTTTCGAGCCTCAGCGTCAGTACCGAAACGGAA4610.3342396229835055No Hit
CCCGTTCGCTACCCTGGCTTTCGCACCTCAGCGTCAGTTACCGTCCAGCA4420.32046402030088816No Hit
CCTGTTTGCTCCCCGCACCTTCGCACCTCAGCGTCAGTCGTCCGCCGGTA3990.2892876563349646No Hit
CCTGTTCGCTACCCACGCTTTCGAGCCTCAGCGTCAGTTACAGACCAGAG3700.26826173645096973No Hit
CCTGTTTGCTACCCACGCTTTCGAGCCTCAGCGTCAGTTACAGACCAGAG3610.2617364509697299No Hit
CCTGTTCGCTACCCATGCTTTCGAGTCTCAGCGTCAGTTGCAGACCAGGT3600.26101141924959215No Hit
CCTGTTCGATACCCACGCTTTCGAGCATCAGCGTCAGTTGCGCTACAGTA3250.2356353090447707No Hit
CCTGTTCGCTCCCCACGCTTTCGCTCCTCAGCGTCAGTAACAGCCCAGAG3110.22548486496284212No Hit
CCTGTTCTCTCCCCACGCTTTCGAGCCTCAGCGTCAGTTACAGACCAGAG2760.20010875475802067No Hit
CCTGTTCGCTCCCCACGCTTTCGAGCCTCAGCGTCAGTGACAGACCAGAG2750.19938372303788288No Hit
CCTGTTTGCTCCCCACGCTTTCGTACCTGAGCGTCAGTAAAAGTCCAGAA2590.1877832155156788No Hit
CCTGTTTGATACCCACGCTTTCGTGCTTCAGTGTCAGTTATACCTTAGTA2360.17110748595251044No Hit
CCTGTTTGCTCCCCACGCTTTCGTGCTTGAGCGTCGATAAAGACCCAGAC2220.16095704187058182No Hit
CCTGTTCGCTCCCCACGCTTTCGCTTCTCAGCGTCAGTTACAGCCCAGAG2170.15733188326989306No Hit
CCTGTTTGATCCCCACGCTTTCGTGCATCAGCGTCAGTTGTATGATAGTA2070.1500815660685155No Hit
CCTGTTCGCTCCCCGCACTTTCGCACCTCAGCGTCAATTATCTGCCGGTA2050.14863150262824No Hit
CCTGTTTGCTCCCCACGCTTTCACGCATTAGCGTCAGTTGAGTTCCAGCA2040.14790647090810224No Hit
CCTGTTCGATACCCGCACCTTCGAGCTTCAGCGTCAGTTGCGCTCCCGCC2030.14718143918796447No Hit
CCTGTTCGATACCCGCACTTTCGAGCTTCAGCGTCAGTTGTGCTCCCGCA2010.14573137574768896No Hit
CCTGTTTGCTACCCACGCTTTCGCGCTTTAGCGTCAGTATCTGTCCAGTA1990.14428131230741345No Hit
CCTGTTCGCTCCCCATGCTTTCGCTTCTCAGCGTCAGTTACAGACCAGAG1950.14138118542686243No Hit
CCTGTTCGCTACCCATGCTTTCGAGCCTCAGCGTCAGTTGCAGACCAGAC1900.13775602682617366No Hit
CCTGTTCGCTCCCCACGCTTTCGAGCCTCAGCGTCAGTTACAGCCCAGAG1750.1268805510241073No Hit
CCCGTTTGCTACCCTGGCTTTCGCACCTCAGCGTCAGTTACTGGCCAGCA1730.1254304875838318No Hit
CCTGTTTGCTACCCATACTTTCGAGCCTCAGCGTCAGTTACAGACCAGAC1720.12470545586369404No Hit
CCTGTTCGCTCCCCACGCTTTCGCGCCTCAGTGTCAGTTACAGGCCAAAA1700.12325539242341853No Hit
CCTGTTCGCTCCCCGCACTTTCGCACCTCAGCGTCAATTATCTGCCAGTA1690.12253036070328077No Hit
CCTGTTCGCTCCCCACGCTTTCGATCCTCAGCGTCAGTTACAGACCAGAG1640.11890520210259198No Hit
CCTGTTCGCTCCCCACGCTTTCGAGCCTCAGCGTCAGTTACAAGCCAGAG1630.11818017038245424No Hit
CCTGTTTGATACCCGCACCTTCGAGCTTAAGCGTCAGTTGCGCTCCCGTC1590.11528004350190321No Hit
CCTGTTCGCTCCCCACGCTTTCGCTCCTCAGCGTCAGTGACGGCCCAGAG1530.11092985318107668No Hit
CCTGTTTGCTCCCCACGCTTTCACGCATTAGCGTCAGTTAAGTTCCAGCA1470.10657966286025014No Hit
CCTGTTTGCTCCCCACGCTTTCGTACCTCAGTGTCAGTTGCAGTCCAGAA1450.10512959941997463No Hit
CCTGTTCGCTCCCCACGCTTTCGCTCCTCAGCGTCAGTAATAGCCCAGAG1450.10512959941997463No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)