FastQCFastQC Report
Thu 16 Jun 2022
EGAF00005302250

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005302250
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences131087333
Sequences flagged as poor quality0
Sequence length150
%GC58

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGTGCCATAATCTCGTAT3315721625.2939893132161TruSeq Adapter, Index 20 (97% over 38bp)
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGTGCCATAATCGCGTAT1392700.10624214927005952TruSeq Adapter, Index 20 (97% over 38bp)

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)