FastQCFastQC Report
Sat 2 Jul 2022
EGAF00005302288

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005302288
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences88410139
Sequences flagged as poor quality0
Sequence length76
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACACTCTCGAATCGGGGGT8141650.9208955095071166TruSeq Adapter, Index 13 (97% over 37bp)
GATCGGAAGAGCACACGTCTGAACTCCAGTCACACTCTCGAATCGGGGAT4101570.46392529707480723TruSeq Adapter, Index 13 (97% over 37bp)
GATCGGAAGAGCACACGTCTGAACTCCAGTCACACTCTCGAATCGGGGTT2687340.30396287466531413TruSeq Adapter, Index 13 (97% over 37bp)
GATCGGAAGAGCACACGTCTGAACTCCAGTCACACTCTCGAATCGCGGAT1471960.16649221646399628TruSeq Adapter, Index 13 (97% over 37bp)
GATCGGAAGAGCACACGTCTGAACTCCAGTCACACTCTCGAATCGGGTAT1197390.13543582371248167TruSeq Adapter, Index 13 (97% over 37bp)
GATCGGAAGAGCACACGTCTGAACTCCAGTCACACTCTCGAATCGCGGGT1109640.12551049150595725TruSeq Adapter, Index 13 (97% over 37bp)
GATCGGAAGAGCACACGTCTGAACTCCAGTCACACTCTCGAATCGGGGGG1075560.12165573000626094TruSeq Adapter, Index 13 (97% over 37bp)
GATCGGAAGAGCACACGTCTGAACTCCAGTCACACTCTCGAATCGGGTGT979060.11074069230905745TruSeq Adapter, Index 13 (97% over 37bp)

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)