EGAF00005304719 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005304719
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	34811314
Sequences flagged as poor quality	0
Sequence length	75
%GC	30

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CAAATAATTCCATTCCATTACATTCCGTTCCATTACATTCCCCTACACTCGCGTTAATTCCATTCCATTCCATTC	193542	0.5559744168232201	No Hit
CAAAAAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCGCGTTAATTCCATTCCATTCCATTC	106565	0.30612173961603406	No Hit
CAAATAATTCCATTCCATTACATTCCGTTCCATTACATTCCCCTACACTCGAATTAATTCCATTCCATTCCATTC	62742	0.18023450651704787	No Hit
CAAATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCGAATTAATTCCATTCCATTCCATTC	61181	0.1757503322052135	No Hit
CAAATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCAAATTAATTCCATTCCATTCCATTC	54936	0.15781076232859237	No Hit
CAAATAATTCCATTCCATTAAATTCCATTCCATTCCATTCCCCTACACTTAAATTAATTCCATTCCATTCCATTC	50539	0.14517981136822355	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCGCGTT	90065	67.02712	49
CTCGCGT	88365	66.80195	48
GCGTTAA	88160	66.22334	51
GTTAATT	98800	66.019	53
CGCGTTA	89390	65.896355	50
ACTCGCG	88710	65.429565	47
GGTCCGG	650	65.27766	68
CACTCGC	103105	65.03984	46
GTAGCGG	755	64.88143	43
ACACTCG	188250	64.75975	45
CGTTGAT	1110	64.64278	52
CAATAGG	790	64.62667	14
TAGCGGT	775	64.54382	44
GTTGATT	1175	64.29638	53
GCGTTGA	1010	64.21199	51
CGTTAAT	100335	64.04278	52
AGTAGCG	795	63.78602	42
TTAGTAG	800	63.38799	40
TAGGACC	790	63.318764	17
CGGTAGT	60	63.24426	52