EGAF00005304737 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005304737
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	37460690
Sequences flagged as poor quality	0
Sequence length	75
%GC	30

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CAAATAATTCCATTCCATTACATTCCGTTCCATTACATTCCCCTACACTCGCGTTAATTCCATTCCATTCCATTC	158687	0.42360938893544137	No Hit
CAAAAAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCGCGTTAATTCCATTCCATTCCATTC	100435	0.2681077150474271	No Hit
CAAATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCAAATTAATTCCATTCCATTCCATTC	83974	0.22416565204751968	No Hit
CAAATAATTCCATTCCATTAAATTCCATTCCATTCCATTCCCCTACACTTAAATTAATTCCATTCCATTCCATTC	60513	0.16153733420286706	No Hit
CAAATAATTCCATTCCATTACATTCCATTCCATTACATTCCCCTACACTCGCGTTAATTCCATTCCATTCCATTC	45335	0.12102019476950372	No Hit
CAAATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCGAATTAATTCCATTCCATTCCATTC	44278	0.11819857028794718	No Hit
CAAATAATTCCATTCCATTACATTCCGTTCCATTACATTCCCCTACACTCGAATTAATTCCATTCCATTCCATTC	41113	0.10974971363314451	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCGCGTT	81925	66.74056	49
CTCGCGT	80830	66.53927	48
TAGCGGT	995	66.22363	44
GCGTTAA	80210	66.15897	51
GTTAATT	89570	66.03553	53
GTAGCGG	985	65.84523	43
CGCGTTA	81670	65.7704	50
ATAGGAC	1035	65.66664	16
TAGGACC	1040	65.35085	17
GGACCAG	1025	65.2964	19
CAATAGG	1045	65.03912	14
AGTAGCG	1015	64.91874	42
ACTCGCG	82120	64.75463	47
TAGTAGC	1030	64.64388	41
CACTCGC	96955	64.3613	46
ACACTCG	153665	64.21568	45
CGTTAAT	90580	64.11091	52
CTCGAGT	1350	63.886738	48
GTCCGGC	905	63.660587	69
TTAGTAG	1050	63.41257	40