EGAF00005304757 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005304757
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	31275220
Sequences flagged as poor quality	0
Sequence length	75
%GC	30

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CAAATAATTCCATTCCATTACATTCCGTTCCATTACATTCCCCTACACTCGCGTTAATTCCATTCCATTCCATTC	142635	0.4560639381593479	No Hit
CAAATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCAAATTAATTCCATTCCATTCCATTC	93644	0.2994191567637254	No Hit
CAAAAAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCGCGTTAATTCCATTCCATTCCATTC	83982	0.2685256890279269	No Hit
CAAATAATTCCATTCCATTAAATTCCATTCCATTCCATTCCCCTACACTTAAATTAATTCCATTCCATTCCATTC	48873	0.15626748588818878	No Hit
CAAATAATTCCATTCCATTACATTCCATTCCATTACATTCCCCTACACTCGCGTTAATTCCATTCCATTCCATTC	45807	0.14646419753402215	No Hit
CAAATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCATATTAATTCCATTCCCTTCCATTC	36216	0.11579774658659475	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGTTAG	195	67.212845	51
TCGCGTT	84185	66.63811	49
CTCGCGT	80925	66.51888	48
GTTAATT	91725	66.214066	53
GCGTTAA	82390	66.12656	51
CGCGTTA	83710	65.557655	50
GCGTTGA	895	64.742516	51
ACTCGCG	82350	64.723274	47
CGTTAAT	91265	64.5864	52
ACACTCG	133190	64.57506	45
CACTCGC	94665	64.41326	46
CGTTGAT	975	64.38283	52
GAGTTAA	2025	64.38283	51
CGAGTTA	2000	64.15289	50
CAATAGG	795	63.891075	14
TAGGACC	795	63.789215	17
GTTGATT	1115	63.41359	53
TCGAGTT	2210	63.363197	49
TAGTAGC	790	63.305195	41
AGTAGCG	780	63.231518	42