EGAF00005304803 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005304803
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	40061807
Sequences flagged as poor quality	0
Sequence length	75
%GC	31

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CAAATAATTCCATTCCATTACATTCCGTTCCATTACATTCCCCTACACTCGCGTTAATTCCATTCCATTCCATTC	210066	0.5243547801026549	No Hit
CAAAAAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCGCGTTAATTCCATTCCATTCCATTC	115983	0.28951015614447945	No Hit
CAAATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCGAATTAATTCCATTCCATTCCATTC	96188	0.24009900501991832	No Hit
CAAATAATTCCATTCCATTACATTCCGTTCCATTACATTCCCCTACACTCGAATTAATTCCATTCCATTCCATTC	82312	0.20546252444379257	No Hit
CAAATAATTCCATTCCATTAAATTCCATTCCATTCCATTCCCCTACACTTAAATTAATTCCATTCCATTCCATTC	75968	0.18962699311091982	No Hit
CAAATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCAAATTAATTCCATTCCATTCCATTC	70821	0.1767793449756273	No Hit
CAAATAATTCCATTCCATTACATTCCGTTCCATTACATTCCCCTACACTCGCATTAATTCCATTCCATTCCATTC	48324	0.12062361540506647	No Hit
CAAATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCGTATTAATTCCATTCCCTTCCATTC	42702	0.10659029933422624	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCGCGTT	104345	66.81514	49
CTCGCGT	101365	66.71633	48
GCGTTAA	100755	66.286766	51
GTTAATT	120970	66.2306	53
CGCGTTA	102525	65.72107	50
ACTCGCG	103010	64.95118	47
CGTTAAT	121560	64.64925	52
CACTCGC	126515	64.62935	46
ACACTCG	240800	64.476685	45
GTTGATT	1470	64.06024	53
GCGTTGA	1200	63.813847	51
CGTTGAT	1385	63.757816	52
GCATTAA	24685	62.699802	51
CTCGAGT	1915	61.778084	48
GCCATTC	59480	61.422775	10
CTCGCAT	25445	61.323822	48
CAATAGG	745	61.16135	14
ATTCCCC	377090	60.88823	37
GCGTTAG	205	60.574783	51
TTCCCCT	383545	60.560677	38