FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005304805

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005304805
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences38433640
Sequences flagged as poor quality0
Sequence length75
%GC31

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAAATAATTCCATTCCATTACATTCCGTTCCATTACATTCCCCTACACTCGCGTTAATTCCATTCCATTCCATTC1746700.45447165556007707No Hit
CAAAAAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCGCGTTAATTCCATTCCATTCCATTC966950.2515894929546096No Hit
CAAATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCAAATTAATTCCATTCCATTCCATTC708780.1844165684020561No Hit
CAAATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCGAATTAATTCCATTCCATTCCATTC580880.151138429771419No Hit
CAAATAATTCCATTCCATTAAATTCCATTCCATTCCATTCCCCTACACTTAAATTAATTCCATTCCATTCCATTC578720.15057642211354427No Hit
CAAATAATTCCATTCCATTACATTCCGTTCCATTACATTCCCCTACACTCGAATTAATTCCATTCCATTCCATTC540110.14053053522903372No Hit
CAAAAAAAAAAACCCCATTCTATACCAACACCTATTCTAATTTTTCAATCACCCTAAAATTTATATTCTTATCCT418570.10890719692436106No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)