EGAF00005304815 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005304815
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	39839300
Sequences flagged as poor quality	0
Sequence length	75
%GC	30

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CAAATAATTCCATTCCATTACATTCCGTTCCATTACATTCCCCTACACTCGCGTTAATTCCATTCCATTCCATTC	144252	0.3620846751825459	No Hit
CAAAAAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCGCGTTAATTCCATTCCATTCCATTC	93268	0.23411053909079726	No Hit
CAAATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCAAATTAATTCCATTCCATTCCATTC	84194	0.2113340344835376	No Hit
CAAATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCGAATTAATTCCATTCCATTCCATTC	47670	0.1196557168424144	No Hit
CAAATAATTCCATTCCATTAAATTCCATTCCATTCCATTCCCCTACACTTAAATTAATTCCATTCCATTCCATTC	46854	0.11760748808337496	No Hit
CAAATAATTCCATTCCATTACATTCCATTCCATTACATTCCCCTACACTCGCGTTAATTCCATTCCATTCCATTC	45230	0.1135311112394043	No Hit
CAAATAATTCCATTCCATTACATTCCGTTCCATTACATTCCCCTACACTCGAATTAATTCCATTCCATTCCATTC	41485	0.10413084567248922	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCGCGTT	79670	66.60348	49
CTCGCGT	78260	66.42808	48
GTTAATT	91000	65.78999	53
GCGTTAA	78905	65.75391	51
CGCGTTA	80195	65.25975	50
CTCGAGT	1680	65.09642	48
CGAGTTA	1615	64.939384	50
ACTCGCG	79130	64.359276	47
TCGAGTT	1785	64.1663	49
GAGTTAA	1620	64.10008	51
ACACTCG	157925	64.08074	45
CACTCGC	96695	64.010284	46
GTAGCGG	620	63.43294	43
CGTTGAT	985	63.3934	52
CGTTAAT	92795	63.22732	52
GTCGCCG	27000	63.004696	44
GCGTTGA	880	62.72554	51
GGTCGCC	27160	62.608128	43
TAGGACC	740	62.47266	17
TAGTAGC	675	62.35415	41