FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005304847

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005304847
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27926980
Sequences flagged as poor quality0
Sequence length75
%GC32

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAAATAATTCCATTCCATTACATTCCGTTCCATTACATTCCCCTACACTCGCGTTAATTCCATTCCATTCCATTC1990610.712790999957747No Hit
CAAATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCAAATTAATTCCATTCCATTCCATTC1175840.4210408715872607No Hit
CAAAAAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCGCGTTAATTCCATTCCATTCCATTC1154100.4132562847826725No Hit
CAAATAATTCCATTCCATTACATTCCATTCCATTACATTCCCCTACACTCGCGTTAATTCCATTCCATTCCATTC810900.2903643716578019No Hit
CAAATAATTCCATTCCATTAAATTCCATTCCATTCCATTCCCCTACACTTAAATTAATTCCATTCCATTCCATTC676470.24222812491719475No Hit
CAAATAATTCCATTCCATTACATTCCATTCCATTACATTCCCCTACACTCAAATTAATTCCATTCCATTCCATTC576340.20637390795567584No Hit
CAAAAAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCACATTAATTCCATTCCATTCCATTC528430.18921845469864626No Hit
CAAATAATTCCATTCCATTACATTCCGTTCCATTACATTCCCCTACACTCGCATTAATTCCATTCCATTCCATTC451260.16158567807904758No Hit
CAAATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCAAATTAATTCCATTCCATTCCACTC430420.15412336027740917No Hit
CAAATAATTCCATTCCATTACATTCCGTTCCATTACATTCCCCTACACTCGAATTAATTCCATTCCATTCCATTC412250.14761710718452192No Hit
CAAATAATTCCATTCCATTACATTCCATTCCATTACATTCCCCTACACTCACATTAATTCCATTCCATTCCATTC400040.14324499104450247No Hit
CAAAAAATTCCATTCCATTACATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTC372020.13321168275266426No Hit
CAAATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCATATTAATTCCATTCCCTTCCATTC333470.11940782712631297No Hit
CAAATAACTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCAAATTCATTACCTTCCATTCCATTT319900.11454872671516934No Hit
CAAATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCGAATTAATTCCATTCCATTCCATTC292780.10483768742628097No Hit
CAAATAATTCCATTCCATTACATTCCGTTCCATTACATTCCCCTACACTCACATTAATTCCATTCCATTCCATTC281900.10094181325728739No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)