EGAF00005304859 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005304859
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	38752342
Sequences flagged as poor quality	0
Sequence length	75
%GC	31

Per base quality graph

Per base quality graph

Per Sequence quality graph

$Per base sequence content$

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CAAATAATTCCATTCCATTACATTCCGTTCCATTACATTCCCCTACACTCGCGTTAATTCCATTCCATTCCATTC	132255	0.34128259912652503	No Hit
CAAAAAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCGCGTTAATTCCATTCCATTCCATTC	69469	0.17926400422457048	No Hit
CAAATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCGAATTAATTCCATTCCATTCCATTC	54643	0.14100567134755365	No Hit
CAAATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCAAATTAATTCCATTCCATTCCATTC	47798	0.12334222277456161	No Hit
CAAATAATTCCATTCCATTAAATTCCATTCCATTCCATTCCCCTACACTTAAATTAATTCCATTCCATTCCATTC	44332	0.11439824720787198	No Hit
CAACTAATTTTTTATATTTTTAATAAAAACGAAATTTCACCGTATTAACCAAAATAATCTCGATCTCCTAACCTC	39212	0.10118614250462592	No Hit
CAAATAATTCCATTCCATTACATTCCGTTCCATTACATTCCCCTACACTCGAATTAATTCCATTCCATTCCATTC	38906	0.10039651280947097	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCGCGTT	63815	66.48156	49
CAATAGG	1040	66.06501	14
CTCGCGT	62370	65.98702	48
GTTAATT	71435	65.369736	53
GCGTTAA	62315	65.257385	51
CGCGTTA	63810	64.27432	50
GCGTTGA	655	63.705788	51
ACTCGCG	64475	63.426064	47
ACACTCG	138800	63.40708	45
TAGGACC	1090	63.349545	17
GGACCAG	1070	63.17736	19
CGTTGAT	725	62.787464	52
CACTCGC	75630	62.76637	46
ATAGGAC	1095	62.754463	16
GCCATTC	63335	62.660915	10
TAGCGGT	1065	62.49767	44
GTAGCGG	1060	62.467598	43
CGTTAAT	73345	62.252174	52
AGTAGCG	1075	61.914295	42
CGAGTTA	1370	61.670906	50