EGAF00005304869 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005304869
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	39677422
Sequences flagged as poor quality	0
Sequence length	75
%GC	32

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CAAATAATTCCATTCCATTACATTCCGTTCCATTACATTCCCCTACACTCGCGTTAATTCCATTCCATTCCATTC	277029	0.6982031241848324	No Hit
CAAAAAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCGCGTTAATTCCATTCCATTCCATTC	119357	0.3008184352299905	No Hit
CAAATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCGAATTAATTCCATTCCATTCCATTC	103435	0.2606898200190526	No Hit
CAAATAATTCCATTCCATTACATTCCGTTCCATTACATTCCCCTACACTCGAATTAATTCCATTCCATTCCATTC	89078	0.22450551348825032	No Hit
CAAATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCAAATTAATTCCATTCCATTCCATTC	82641	0.2082821812364725	No Hit
CAAATAATTCCATTCCATTAAATTCCATTCCATTCCATTCCCCTACACTTAAATTAATTCCATTCCATTCCATTC	79306	0.1998768972439792	No Hit
CAAATAATTCCATTCCATTACATTCCGTTCCATTACATTCCCCTACACTCGCATTAATTCCATTCCATTCCATTC	48456	0.1221248699071225	No Hit
CAAATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCGTATTAATTCCATTCCCTTCCATTC	45606	0.11494194355671597	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCGCGTT	133660	67.03154	49
CTCGCGT	128465	66.8533	48
GCGTTAA	129125	66.68051	51
GTTAATT	153735	66.48672	53
CGCGTTA	131370	66.255196	50
ACTCGCG	129645	65.53449	47
CACTCGC	152540	65.41872	46
CGTTAAT	152605	65.32704	52
ACACTCG	281245	65.052284	45
GCGTTGA	1410	64.09578	51
GGACCAG	820	63.93967	19
TAGGACC	825	63.55224	17
CGTTGAT	1630	63.48667	52
CAATAGG	845	63.394363	14
GAGTTAA	3100	63.31372	51
CGGGTTA	420	63.239532	50
CTCGAGT	2775	63.01637	48
GTTGATT	1905	63.013115	53
GTAGCGG	825	62.71034	43
GCATTAA	25350	62.56598	51