FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005304877

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005304877
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences38493469
Sequences flagged as poor quality0
Sequence length100
%GC31

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAAATAATTCCATTCCATTACATTCCGTTCCATTACATTCCCCTACACTC3572070.9279678066946888No Hit
CAAATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTC2888400.7503610547545092No Hit
CAAAAAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTC1975960.5133234419584268No Hit
CAAATAATTCCATTCCATTACATTCCATTCCATTACATTCCCCTACACTC1153260.29959887481172454No Hit
CAAAAAATTCCATTCCATTACATTCCATTCCATTCCATTCCATTCCATTC863820.22440689873910818No Hit
CAAATTCACGCCATTCTCCTACCTCAACCTCCCGAATAACTAAAACTACA783080.20343191204720987No Hit
CAAATTCACGCCATTCTCCTACCTCAACCTCCCAAATAACTAAAACTACA716430.1861172865454137No Hit
CAAACGCGATAACTCACGCCTATAATCCCAACACTTTAAAAAACCGAAAC697410.18117618861526874No Hit
CAACTAATTTTTTATATTTTTAATAAAAACGAAATTTCACCGTATTAACC697010.1810722748838251No Hit
CAAATAATTCCATTCCATTAAATTCCATTCCATTCCATTCCCCTACACTT646990.16807786276679818No Hit
CAACCTATTTATCTATTTATTAACTTTAAATCCAAATTATAAAACCAATT642920.16702054054935916No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)