FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005304879

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005304879
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences33162636
Sequences flagged as poor quality0
Sequence length100
%GC31

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CAAATAATTCCATTCCATTACATTCCGTTCCATTACATTCCCCTACACTC3354161.0114274390009286No Hit
CAAATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTC2798890.8439890001506514No Hit
CAAAAAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTC1735220.5232454983373457No Hit
CAAATTCACGCCATTCTCCTACCTCAACCTCCCGAATAACTAAAACTACA805720.24296017964313812No Hit
CAAATAATTCCATTCCATTACATTCCATTCCATTACATTCCCCTACACTC798920.24090967919438008No Hit
CAAAAAATTCCATTCCATTACATTCCATTCCATTCCATTCCATTCCATTC737600.22241898985352068No Hit
CAACTAATTTTTTATATTTTTAATAAAAACGAAATTTCACCGTATTAACC654860.19746922409907344No Hit
CAAATTCACGCCATTCTCCTACCTCAACCTCCCAAATAACTAAAACTACA598290.18041086963050826No Hit
CAAACGCGATAACTCACGCCTATAATCCCAACACTTTAAAAAACCGAAAC596430.1798499974489362No Hit
CAAATAATTCCATTCCATTAAATTCCATTCCATTCCATTCCCCTACACTT547100.1649748228699311No Hit
CAACCTATTTATCTATTTATTAACTTTAAATCCAAATTATAAAACCAATT489980.14775061910036344No Hit
CAACTAATTTTTTATATTTTTAATAAAAACGAAATTTCACCTTATTAACC338770.1021541230920244No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)