FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005304903

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005304903
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31039039
Sequences flagged as poor quality0
Sequence length100
%GC31

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAAATAATTCCATTCCATTACATTCCGTTCCATTACATTCCCCTACACTC1607890.5180218369518463No Hit
CAAATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTC1468680.47317186592020455No Hit
CAAATAATTCCATTCCATTACATTCCATTCCATTACATTCCCCTACACTC960110.30932336532712884No Hit
CAAAAAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTC943190.3038721656298702No Hit
CAACCTATTTATCTATTTATTAACTTTAAATCCAAATTATAAAACCAATT868960.2799571210951473No Hit
CAACTACATTTATTTATTTATTTTTTTAATTATTTTACTTTTTTTTAATT605830.19518323360462286No Hit
CAACTAATTTTTTATATTTTTAATAAAAACGAAATTTCACCGTATTAACC520530.16770171267222544No Hit
CAAACGCGATAACTCACGCCTATAATCCCAACACTTTAAAAAACCGAAAC518920.16718301104618605No Hit
CAAATTCACGCCATTCTCCTACCTCAACCTCCCAAATAACTAAAACTACA454210.1463350717784787No Hit
CAAAAAATTCCATTCCATTACATTCCATTCCATTCCATTCCATTCCATTC449610.1448530671326519No Hit
CAAATTCACGCCATTCTCCTACCTCAACCTCCCGAATAACTAAAACTACA441230.14215324127786302No Hit
CAACGTATTATATTATATTATATTATATTATATTATATTATATTATATTA394750.12717855085655197No Hit
CAAATTCACACCATTCTCCTACCTCAACCTCCCAAATAACTAAAACTACA313990.10115970407460102No Hit
CAACTAATTTTTTATATTTTTAATAAAAACAAAATTTCACCATATTAACC312480.10067321994086222No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)