FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005304913

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005304913
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31152331
Sequences flagged as poor quality0
Sequence length100
%GC31

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CAAATAATTCCATTCCATTACATTCCGTTCCATTACATTCCCCTACACTC5645641.8122688796546236No Hit
CAAATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTC3747481.2029533199297349No Hit
CAAAAAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTC2945460.9455022803911528No Hit
CAAATAATTCCATTCCATTACATTCCATTCCATTACATTCCCCTACACTC1665170.5345250087385114No Hit
CAAAAAATTCCATTCCATTACATTCCATTCCATTCCATTCCATTCCATTC1329450.4267577922178601No Hit
CAAATAATTCCATTCCATTAAATTCCATTCCATTCCATTCCCCTACACTT862800.27696161805676756No Hit
CAACTAATTTTTTATATTTTTAATAAAAACGAAATTTCACCGTATTAACC587310.1885284282579047No Hit
CAAACGCGATAACTCACGCCTATAATCCCAACACTTTAAAAAACCGAAAC576950.18520283442031996No Hit
CAAATTCACGCCATTCTCCTACCTCAACCTCCCGAATAACTAAAACTACA575420.18471169942307047No Hit
CAAAAAATTCCATTCCATTACATTCCATTACATTCCATTCCCCTACACTC504580.16197182804715318No Hit
CAAATTCACGCCATTCTCCTACCTCAACCTCCCAAATAACTAAAACTACA469980.150865115037459No Hit
CAACCTATTTATCTATTTATTAACTTTAAATCCAAATTATAAAACCAATT460590.14785089436806512No Hit
CAAATAACTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTC403620.12956333829401082No Hit
CAAATAATTCCATTCCATTACATTCCTTTCCATTACATTCCCCTACACTC316680.10165531433265779No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)