Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005305529 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 21611303 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 54 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AAGTCGG | 8590 | 0.0 | 52.416763 | 94 |
CAAGTCG | 7070 | 0.0 | 27.32249 | 94 |
TAAGTCG | 2445 | 0.0 | 23.067486 | 94 |
GAAGTCG | 10565 | 0.0 | 15.970657 | 94 |
CGCGTAA | 620 | 0.0 | 14.403226 | 1 |
GTTCGAT | 2930 | 0.0 | 14.27645 | 1 |
GTCCGAT | 1525 | 0.0 | 13.252459 | 1 |
AAAGTCG | 3795 | 0.0 | 12.880106 | 94 |
TATACGG | 1670 | 0.0 | 12.101797 | 34-35 |
GCGGTAT | 2065 | 0.0 | 11.607748 | 1 |
GTCGAAA | 3025 | 0.0 | 11.49752 | 1 |
GTCGGAT | 2575 | 0.0 | 10.768932 | 1 |
TTCGATT | 3580 | 0.0 | 10.765363 | 2 |
GCCGGTT | 5055 | 0.0 | 10.692384 | 1 |
GTCGGAA | 2955 | 0.0 | 10.497462 | 1 |
GGCGATT | 3900 | 0.0 | 10.243589 | 1 |
CGCGGGT | 6370 | 0.0 | 10.034536 | 1 |
TCGGATT | 2475 | 0.0 | 9.874747 | 2 |
AATCGCG | 575 | 1.1657925E-5 | 9.808696 | 5 |
GTATACG | 1725 | 0.0 | 9.808695 | 34-35 |