Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005306051 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 22333482 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 53 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AAGTCGG | 11770 | 0.0 | 57.262535 | 94 |
CAAGTCG | 9055 | 0.0 | 28.9111 | 94 |
TAAGTCG | 3870 | 0.0 | 25.139536 | 94 |
GAAGTCG | 14100 | 0.0 | 21.933332 | 94 |
AAAGTCG | 5145 | 0.0 | 18.178816 | 94 |
TATACGC | 835 | 0.0 | 17.449102 | 7 |
TACGCTA | 855 | 0.0 | 15.391814 | 9 |
ATATACG | 1130 | 0.0 | 14.557523 | 6 |
CGAAAAT | 3125 | 0.0 | 12.784 | 1 |
CGAAGAT | 8595 | 0.0 | 12.57708 | 1 |
GTTTTTT | 28160 | 0.0 | 12.517756 | 1 |
GTCGGTT | 4530 | 0.0 | 12.03532 | 1 |
CGCAATT | 2000 | 0.0 | 11.985002 | 1 |
CGGAAAT | 4275 | 0.0 | 11.433919 | 1 |
GCCGATT | 2295 | 0.0 | 11.2636175 | 1 |
AAATCGA | 3235 | 0.0 | 11.041732 | 4 |
CGCAAAC | 3895 | 0.0 | 10.980744 | 1 |
GTTTAAT | 8850 | 0.0 | 10.833899 | 1 |
GTTTATT | 10350 | 0.0 | 10.80773 | 1 |
CTTTATT | 16185 | 0.0 | 10.686439 | 1 |