FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005307777

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005307777
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25
Sequences flagged as poor quality0
Sequence length249-251
%GC55

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTACGGGCGGCAGCAGTGGGGAATATTGGACAATGGGGGCAACCCCGAT28.0No Hit
CCTACGGGAGGCAGCAGTGGGGAATCTTCCGCAATGGACGAAAGTCTGAC28.0No Hit
CCTACGGGGGGCTGCAGTAGGGAATCTTCGGCAATGGACGCAAGCCTGAC14.0No Hit
CCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGAT14.0No Hit
CCTACGGGGGGCTGCAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGAC14.0No Hit
CCTACGGGGGGCTGCAGTGGGGAATATTGCGCAATGGGGGCAACCCTGAC14.0No Hit
CCTACGGGGGGCAGCAGTGAGGAATATTGGGCAATGGACGCAAGCCTGAC14.0No Hit
CCTACGGGCGGCTGCAGTGGGGAATATTGCTCAATGGGCGAAACTCTGAA14.0No Hit
CCTACGGGTGGCTGCAGTGGGGAATATTGGACAATGGACCGAGAGTTGGT14.0No Hit
CCTACGGGGGGCAGCAGTGGGGAATCTTCCGCAATGGACGAAGGTCCTAC14.0No Hit
CCTACGGGCGGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGAT14.0No Hit
CCTACGGGCGGCAGCAGTGGGGAATTTTGGACAATGGGCGCAAGCCTGAT14.0No Hit
CCTACGGGCGGCTGCAGTAGGGAATCTTCCGCAATGGACGCAAGTCTGAC14.0No Hit
CCTACGGGTGGCAGCAGTGGGGAATTTTGCACAATGGGCGCAAGCCTGAT14.0No Hit
CCTACGGGCGGCTGCAGTGGGGAATCTTCCGCAATGGGCGCAAGCCTGAC14.0No Hit
CCTACGGGGGGCAGCAGTGGGGAATCTTCCGCAATGGACGAAAGTCTGAC14.0No Hit
CCTACGGGGGGCAGCAGTGGGGAATATTGGACAATGGGGGCAACCCTGAT14.0No Hit
CCTACGGGTGGCTGCAGTGGGGAATATTGGACAATGGACGCAAGCCTGAT14.0No Hit
CCTACGGGGGGCAGCAGTAGGGAATCTTCGGCAATGGACGGAAGCCTGAC14.0No Hit
CCTACGGGGGGCAGCAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGAC14.0No Hit
CCTACGGGGGGCTGCAGTGGGGAATTTTGCACAATGGCGGAAGCCCGAAC14.0No Hit
CCTACGGGAGGCAGCAGTAGGGAATCTTCGGCAATGGACGGAAGTCTGAC14.0No Hit
CCTACGGGTGGCAGCAGTGGGGAATATTGGACAATGGAAGGAAAGCCTAC14.0No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)