FastQCFastQC Report
Thu 12 May 2022
EGAF00005308085

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005308085
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences133247115
Sequences flagged as poor quality0
Sequence length28
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTCGTTATCGGAATTAACCAGACAAA4374460.3282967890149066No Hit
GCTGCGGATATGGGTACGGCCCGGCGCG4093490.3072104037674662No Hit
GTCTCGTTCGTTATCGGAATTAACCAGA3857850.28952596834835786No Hit
TGCCCTCCAATGGATCCTCGTTAAAGGA3183250.23889823055456022No Hit
AAGCCGCAGGCTCCACTCCTGGTGGTGC3133520.2351660671977776No Hit
ACGCCAGAGTCTCGTTCGTTATCGGAAT2439380.18307188114354295No Hit
CCACCTACTAAGAACGGCCATGCACCAC2412530.18105682813470295No Hit
GGGCATCACAGACCTGTTATTGCTCAAT1892840.14205485799823883No Hit
CCCTCCTAATCATGGCCTCAGTTCCGAA1712150.12849433925830214No Hit
CCACCAACTAAGAACGGCCATGCACCAC1539850.1155634776782972No Hit
CTGGTCTGTCTTGCGCCGGTCCAAGAAT1511560.11344035478741885No Hit
GTGCGGTGTGTACAAAGGGCAGGGACTT1355070.10169601045395993No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)