FastQCFastQC Report
Thu 12 May 2022
EGAF00005308167

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005308167
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences113864486
Sequences flagged as poor quality0
Sequence length28
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTCGTTATCGGAATTAACCAGACAAA2667530.23427234370513034No Hit
GTCTCGTTCGTTATCGGAATTAACCAGA2198570.1930865432440454No Hit
CCACCTACTAAGAACGGCCATGCACCAC1455560.12783265890296996No Hit
AAGCCGCAGGCTCCACTCCTGGTGGTGC1426430.12527435463942638No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)