FastQCFastQC Report
Sat 4 Jun 2022
EGAF00005308347

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005308347
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences125940442
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTCGTTCGTTATCGGAATTAACCAGA2363440.18766330834379635No Hit
AAGCCGCAGGCTCCACTCCTGGTGGTGC1354940.10758577455206961No Hit
GATCGGAAGAGCACACGTCTGAACTCCA1311130.10410714613817221Illumina Multiplexing PCR Primer 2.01 (100% over 28bp)

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)