FastQCFastQC Report
Sat 4 Jun 2022
EGAF00005308397

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005308397
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences130391790
Sequences flagged as poor quality0
Sequence length28
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTCGTTATCGGAATTAACCAGACAAA3515990.2696481120475453No Hit
CCACCTACTAAGAACGGCCATGCACCAC3301630.25320842669619No Hit
GTCTCGTTCGTTATCGGAATTAACCAGA2583310.19811906869289853No Hit
AAGCCGCAGGCTCCACTCCTGGTGGTGC2070020.1587538601931916No Hit
ACGCCAGAGTCTCGTTCGTTATCGGAAT2026210.15539398607841798No Hit
GCTGCGGATATGGGTACGGCCCGGCGCG1405030.10775448362201333No Hit
CTGGTCTGTCTTGCGCCGGTCCAAGAAT1370350.10509480696599073No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)