FastQCFastQC Report
Thu 12 May 2022
EGAF00005308401

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005308401
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences131502418
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTCGTTATCGGAATTAACCAGACAAA3560440.2707509150135931No Hit
CCACCTACTAAGAACGGCCATGCACCAC3319880.2524577152642167No Hit
GTCTCGTTCGTTATCGGAATTAACCAGA2614040.19878265660483901No Hit
AAGCCGCAGGCTCCACTCCTGGTGGTGC2098180.15955448058757368No Hit
ACGCCAGAGTCTCGTTCGTTATCGGAAT2039400.15508460080178907No Hit
GCTGCGGATATGGGTACGGCCCGGCGCG1435000.10912346874108428No Hit
CTGGTCTGTCTTGCGCCGGTCCAAGAAT1379150.10487639854652711No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)