FastQCFastQC Report
Fri 1 Jul 2022
EGAF00005308493

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005308493
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences146731240
Sequences flagged as poor quality0
Sequence length28
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTCGTTCGTTATCGGAATTAACCAGA6043730.41189115555760314No Hit
CGTTCGTTATCGGAATTAACCAGACAAA3934580.268148759596116No Hit
CCACCTACTAAGAACGGCCATGCACCAC3200720.2181348702566679No Hit
ACCTTTAAGTTTCAGCTTTGCAACCATA1981590.1350489507210598No Hit
GGCGACTTTTACTTCCTCTAGATAGTCA1687950.11503685241125203No Hit
TGTTCCGTTGGTCAAGTTATTGGATCAA1677790.11434442999323116No Hit
AAGCCGCAGGCTCCACTCCTGGTGGTGC1590760.1084131777254796No Hit
AGGTCCGTCTTGCGCCGGTCCAAGAATT1576990.10747472726326036No Hit
GCTGCGGATATGGGTACGGCCCGGCGCG1493010.10175133802454064No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)