FastQCFastQC Report
Thu 12 May 2022
EGAF00005308501

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005308501
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences145295355
Sequences flagged as poor quality0
Sequence length28
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTCGTTCGTTATCGGAATTAACCAGA5993400.41249770166430993No Hit
CGTTCGTTATCGGAATTAACCAGACAAA3880410.26707047861234107No Hit
CCACCTACTAAGAACGGCCATGCACCAC3168530.21807510639276803No Hit
ACCTTTAAGTTTCAGCTTTGCAACCATA1959170.1348405115910278No Hit
TGTTCCGTTGGTCAAGTTATTGGATCAA1667880.11479238272964748No Hit
GGCGACTTTTACTTCCTCTAGATAGTCA1667660.11477724115819118No Hit
AAGCCGCAGGCTCCACTCCTGGTGGTGC1568140.10792774483396252No Hit
AGGTCCGTCTTGCGCCGGTCCAAGAATT1549890.10667168265633818No Hit
GCTGCGGATATGGGTACGGCCCGGCGCG1459840.10047396215797814No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)