FastQCFastQC Report
Wed 11 May 2022
EGAF00005308533

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005308533
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences107958417
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTCGTTCGTTATCGGAATTAACCAGA2878640.2666434058587576No Hit
AAGCCGCAGGCTCCACTCCTGGTGGTGC2552710.23645307804022359No Hit
CGTTCGTTATCGGAATTAACCAGACAAA2530650.23440969868982053No Hit
CCACCTACTAAGAACGGCCATGCACCAC2045920.18951000365261006No Hit
GCTGCGGATATGGGTACGGCCCGGCGCG1956650.18124107914624202No Hit
ACGCCAGAGTCTCGTTCGTTATCGGAAT1875700.17374282173848474No Hit
GTGGGCAAATTTAAAGTTGAACTAAGAT1398950.12958230019248987No Hit
CTGGTCTGTCTTGCGCCGGTCCAAGAAT1343270.12442475884024864No Hit
ACCTTTAAGTTTCAGCTTTGCAACCATA1339150.12404313042122506No Hit
GCACTCTAATTTTTTCAAAGTAAACGCT1225330.113500182204413No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)