FastQCFastQC Report
Wed 11 May 2022
EGAF00005308599

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005308599
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences106307971
Sequences flagged as poor quality0
Sequence length28
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTCGTTCGTTATCGGAATTAACCAGA3065280.28833962036581434No Hit
AAGCCGCAGGCTCCACTCCTGGTGGTGC2816710.2649575543117082No Hit
CCACCTACTAAGAACGGCCATGCACCAC2148540.20210525888035244No Hit
ACGCCAGAGTCTCGTTCGTTATCGGAAT1973470.1856370676099161No Hit
CGTTCGTTATCGGAATTAACCAGACAAA1645600.15479554209533358No Hit
CTGGTCTGTCTTGCGCCGGTCCAAGAAT1518410.14283124639825925No Hit
GCTGCGGATATGGGTACGGCCCGGCGCG1348120.12681269215457042No Hit
CCCTCCTAATCATGGCCTCAGTTCCGAA1117070.10507866808971454No Hit
TGCCCTCCAATGGATCCTCGTTAAAGGA1097300.10321897687239276No Hit
ACCTTTAAGTTTCAGCTTTGCAACCATA1069260.10058135715900363No Hit
GTGGGCAAATTTAAAGTTGAACTAAGAT1063560.10004517911455575No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)