FastQCFastQC Report
Sat 4 Jun 2022
EGAF00005308629

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005308629
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences133770123
Sequences flagged as poor quality0
Sequence length28
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTCGTTATCGGAATTAACCAGACAAA4399300.32887014688623706No Hit
GCTGCGGATATGGGTACGGCCCGGCGCG4135140.3091228375412348No Hit
GTCTCGTTCGTTATCGGAATTAACCAGA3859380.2885083689427421No Hit
TGCCCTCCAATGGATCCTCGTTAAAGGA3197270.23901226434545475No Hit
AAGCCGCAGGCTCCACTCCTGGTGGTGC3150830.23554063712717077No Hit
ACGCCAGAGTCTCGTTCGTTATCGGAAT2470260.18466455323510467No Hit
CCACCTACTAAGAACGGCCATGCACCAC2423720.1811854505060147No Hit
GGGCATCACAGACCTGTTATTGCTCAAT1904580.1423770837079966No Hit
CCCTCCTAATCATGGCCTCAGTTCCGAA1728650.1292254175470856No Hit
CCACCAACTAAGAACGGCCATGCACCAC1549770.11585322381739904No Hit
CTGGTCTGTCTTGCGCCGGTCCAAGAAT1520340.11365318098720745No Hit
GTGCGGTGTGTACAAAGGGCAGGGACTT1382420.10334295648363873No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)