FastQCFastQC Report
Fri 1 Jul 2022
EGAF00005308631

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005308631
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences138486522
Sequences flagged as poor quality0
Sequence length28
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTCGTTATCGGAATTAACCAGACAAA4568230.3298682019034314No Hit
GCTGCGGATATGGGTACGGCCCGGCGCG4381500.31638457928779523No Hit
GTCTCGTTCGTTATCGGAATTAACCAGA4030090.2910095467629695No Hit
TGCCCTCCAATGGATCCTCGTTAAAGGA3395990.24522169745876066No Hit
AAGCCGCAGGCTCCACTCCTGGTGGTGC3291770.2376960553605354No Hit
ACGCCAGAGTCTCGTTCGTTATCGGAAT2545690.18382222062014092No Hit
CCACCTACTAAGAACGGCCATGCACCAC2527490.1825080133068834No Hit
GGGCATCACAGACCTGTTATTGCTCAAT1986970.14347750028699544No Hit
CCCTCCTAATCATGGCCTCAGTTCCGAA1784480.12885586078910985No Hit
CCACCAACTAAGAACGGCCATGCACCAC1606400.11599684769323616No Hit
CTGGTCTGTCTTGCGCCGGTCCAAGAAT1595870.11523648489056575No Hit
GTGCGGTGTGTACAAAGGGCAGGGACTT1431990.10340284233580506No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)