FastQCFastQC Report
Sun 5 Jun 2022
EGAF00005308703

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005308703
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences110548178
Sequences flagged as poor quality0
Sequence length28
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTCGTTCGTTATCGGAATTAACCAGA3215730.29088946178742087No Hit
AAGCCGCAGGCTCCACTCCTGGTGGTGC2896730.26203326480876055No Hit
CCACCTACTAAGAACGGCCATGCACCAC2212430.20013265166613603No Hit
ACGCCAGAGTCTCGTTCGTTATCGGAAT2061900.18651596410752244No Hit
CGTTCGTTATCGGAATTAACCAGACAAA1724360.15598267028878576No Hit
CTGGTCTGTCTTGCGCCGGTCCAAGAAT1582380.14313940117583848No Hit
GCTGCGGATATGGGTACGGCCCGGCGCG1421910.12862355813770174No Hit
CCCTCCTAATCATGGCCTCAGTTCCGAA1188330.1074943089518852No Hit
TGCCCTCCAATGGATCCTCGTTAAAGGA1183380.10704654037807843No Hit
ACCTTTAAGTTTCAGCTTTGCAACCATA1120260.1013368126248087No Hit
GTGGGCAAATTTAAAGTTGAACTAAGAT1110890.10048921837499665No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)