FastQCFastQC Report
Fri 1 Jul 2022
EGAF00005308721

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005308721
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences124806230
Sequences flagged as poor quality0
Sequence length28
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTCGTTATCGGAATTAACCAGACAAA3355650.2688687896429529No Hit
CCACCTACTAAGAACGGCCATGCACCAC3155460.25282872497630926No Hit
GTCTCGTTCGTTATCGGAATTAACCAGA2456760.19684594270654598No Hit
AAGCCGCAGGCTCCACTCCTGGTGGTGC1998810.16015306287194156No Hit
ACGCCAGAGTCTCGTTCGTTATCGGAAT1926090.15432643065975152No Hit
GCTGCGGATATGGGTACGGCCCGGCGCG1317520.10556524301711541No Hit
CTGGTCTGTCTTGCGCCGGTCCAAGAAT1303060.1044066470079258No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)