FastQCFastQC Report
Sat 4 Jun 2022
EGAF00005308725

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005308725
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences131164846
Sequences flagged as poor quality0
Sequence length28
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTCGTTATCGGAATTAACCAGACAAA3533630.26940373947452356No Hit
CCACCTACTAAGAACGGCCATGCACCAC3295970.2512845553144628No Hit
GTCTCGTTCGTTATCGGAATTAACCAGA2596570.19796234122060416No Hit
AAGCCGCAGGCTCCACTCCTGGTGGTGC2082270.15875214003605814No Hit
ACGCCAGAGTCTCGTTCGTTATCGGAAT2054270.15661742171374182No Hit
GCTGCGGATATGGGTACGGCCCGGCGCG1407880.10733668684366846No Hit
CTGGTCTGTCTTGCGCCGGTCCAAGAAT1364770.10404998302670214No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)