FastQCFastQC Report
Sat 4 Jun 2022
EGAF00005308851

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005308851
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences118129928
Sequences flagged as poor quality0
Sequence length28
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTCGTTATCGGAATTAACCAGACAAA2797120.23678334926268643No Hit
GTCTCGTTCGTTATCGGAATTAACCAGA2313490.19584283501806588No Hit
CCACCTACTAAGAACGGCCATGCACCAC1525650.1291501676018968No Hit
AAGCCGCAGGCTCCACTCCTGGTGGTGC1507510.12761457028908035No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)