FastQCFastQC Report
Thu 12 May 2022
EGAF00005308853

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005308853
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences118547896
Sequences flagged as poor quality0
Sequence length28
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTCGTTATCGGAATTAACCAGACAAA2804580.23657779637016926No Hit
GTCTCGTTCGTTATCGGAATTAACCAGA2329480.19650116776429336No Hit
CCACCTACTAAGAACGGCCATGCACCAC1517270.12798793156143404No Hit
AAGCCGCAGGCTCCACTCCTGGTGGTGC1489610.12565469740601723No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)