FastQCFastQC Report
Fri 1 Jul 2022
EGAF00005308855

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005308855
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences105268729
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGGGCTGTTAATTGTCAGTTCAGTGTT2382860.22635971979864977No Hit
CCTCTATATAAATGCGTAGGGGTTTTAG2058380.1955357511726013No Hit
GCACTCTACTCTCAGTTTACTGCTAAAT1777540.16885736313962715No Hit
TGTTCCGTTGGTCAAGTTATTGGATCAA1506600.14311942533285454No Hit
CGTTCGTTATCGGAATTAACCAGACAAA1488440.1413943166350949No Hit
ACGCCGAGTTCCTTTTACTTTTTTTAAC1420460.1349365584151776No Hit
CGTTGGGTTGACAGTGAGGGTAATAATG1401320.13311835464452126No Hit
GCTGCTTTTAGGCCTACTATGGGTGTTA1307350.124191677093394No Hit
GTCTCGTTCGTTATCGGAATTAACCAGA1286590.12221958146754104No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)