FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005309368

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005309368
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences199430087
Sequences flagged as poor quality0
Sequence length100
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA153300.010.2061531
CGCCGTA29750.09.24223446-47
ATCGGAA221600.07.4234822
GATCGGG125500.06.66401961
AGCGTCG83550.05.76681910-11
ATCGGGA147000.05.59538652
GTCGCCG61350.05.47615344-45
TCGGAAG255100.05.39885573
Produced by FastQC (version 0.11.5)