FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005310005

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005310005
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences109748189
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTAGA123600.09.2107361
AGCGTCG577050.08.1150119
CTCGGTG449400.07.0488529
GAGCGTC690300.06.9201828
GATGTCG125650.06.74987556
ATGTCGG137100.06.7149357
AACTCGG217600.06.59601837
CTCGGCG148400.06.5454719
TCTCGGT398200.06.3168168
AGAGCGT776700.06.271797
GAACTCG223700.06.1892756
CGTAGAT140000.06.1656452
ATATCGG106750.06.1115337
TATCGGT91750.06.00450948
ACTCGGT188050.05.97486838
GCGTCGG104700.05.9577904145
ATCGGCG36609.640644E-115.9416939
CGCCGTA175650.05.88610755-59
ATCGCGG60900.05.83249477
TGTCGGT135850.05.81616748
Produced by FastQC (version 0.11.5)