FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005310013

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005310013
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences51969879
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCCGTA76950.07.80067855-59
TCGCCGT97700.06.351698455-59
GCCGTAT102500.06.153270255-59
AGCGTCG325050.05.9136143145
GTCGCCG114250.05.609274455-59
GATCGGA451500.05.1892195145
CGTATCA129250.05.16017660-64
TGGTCGC133300.05.057668750-54
Produced by FastQC (version 0.11.5)