FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005310047

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005310047
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences62855932
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCCGTA79450.09.07047855-59
AGCGTCG273250.09.0213419
GAGCGTC343850.07.2112618
TCGCCGT101250.07.174809555-59
GCCGTAT110950.06.80891855-59
AGAGCGT381900.06.62579737
ATCGGAA407800.06.21247431
GTCGCCG120800.06.169697855-59
TCGGAAG426550.06.0362092
AAGAGCG468200.05.58964636
TGGTCGC140100.05.558069750-54
CGGAAGA456000.05.51672123
CGTATCA138750.05.43400860-64
GTGGTCG151850.05.299879650-54
Produced by FastQC (version 0.11.5)