FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005310078

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005310078
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences108604058
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA606600.021.9372181
ATCGGAA640350.020.8012262
TCGGAAG668400.019.8290163
CGGAAGA709250.018.6173114
TATGCCG254250.011.34164645-49
AGAGCAC1301750.010.575368
CTCGTAT293850.09.86535340-44
TCTCGTA287800.09.79559840-44
CGTATGC293150.09.78502440-44
GAGCACA1411900.09.729469
GAAGAGC1471550.09.4102156
TCGTATG322150.09.363337540-44
ATGCCGT321200.09.29373945-49
TGCCGTC338700.08.96343945-49
GCCGTCT343850.08.49593445-49
CGTCCAT334750.07.883128635-39
ATCTCGT351550.07.664504540-44
ACCCGTC386600.07.57557530-34
CCGTCCA386800.07.46295630-34
CGTCTTC414700.07.37006150-54
Produced by FastQC (version 0.11.5)