FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005310079

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005310079
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences108604058
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCGTC644950.020.4311859
AGAGCGT715900.018.4771868
GATCGGA720800.018.4286981
ATCGGAA756750.017.5079252
TCGGAAG795050.016.837913
CGGAAGA849350.015.8555814
AAGAGCG866350.015.5696387
CGCCGTA290800.09.78132945-49
GAAGAGC1609250.08.7873866
GCCGTAT334050.08.67116245-49
TCGCCGT311500.08.55888145-49
GTCGCCG348550.08.251389540-44
CGTATCA368200.08.01260945-49
CCGTATC370100.07.955804345-49
TGGTCGC369100.07.925517640-44
GGTCGCC396600.07.42348340-44
GTGGTCG402600.07.348856440-44
TCTCGGT503750.06.022927335-39
GGAAGAG2530250.05.99272255
TCGGTGG515150.05.909341335-39
Produced by FastQC (version 0.11.5)