FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005310092

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005310092
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences103770567
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG195350.06.37620445-49
GATCGGA1030900.05.715519145
AGATCGG1097700.05.6783967145
ACACGTC737600.05.617349145
ATCGGAA1068650.05.5475698145
CTCGTAT238300.05.47619240-44
CGTATGC235150.05.297008545-49
TCTCGTA236700.05.139536440-44
CGTCTGA679950.05.1011386145
ATGCCGT257150.05.08066745-49
TCGGAAG1074050.05.04145
Produced by FastQC (version 0.11.5)