FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005310116

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005310116
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16518502
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA65050.09.856461
ATCGGAA72300.09.1260422
TCGGAAG79200.08.1471083
CGGAAGA85300.07.73398644
TATGCCG26200.07.581645545-49
CGTATGC31150.06.516461440-44
CTCGTAT31550.06.34193240-44
TCTCGTA29950.06.341854640-44
AGATCGG69400.05.538411145
TCGTATG38050.05.52529140-44
ATGCCGT36400.05.417285445-49
TGCCGTC39500.05.175665445-49
Produced by FastQC (version 0.11.5)