FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005310328

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005310328
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8396204
Sequences flagged as poor quality0
Sequence length151
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGGGGGG125900.09.328615145
AAAAGGG155250.08.4056015145
AAGGGGG118700.08.306462145
ACACGTA16408.59327E-87.957132145
AAAGGGG136600.07.207304140-144
CCGTCTT301600.06.706574145
CTTGAAA244250.06.678452145
GCCGTCT309850.06.528007145
GTATGCC368700.06.469201145
TATGCCG335550.06.460139145
CACGACG12350.0042713026.4573013
TTCCATG105100.06.4151692145
GGGGGGG1005900.06.3496385145
ATGCCGT334100.06.3362784145
TCGTATG381200.06.333142145
CGTCTTC291750.06.2372155145
TGCCGTC345800.06.2267203145
CTCGTAT383550.06.0108104145
CGTATGC384000.05.731843140-144
ATCTCGT426400.05.6958103145
Produced by FastQC (version 0.11.5)